Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02020 ATGGAAGCACCAAGCGCTCATCATACGCAAATTATTGAAATAAGTGGAGAACTTCCTGATACAGGAAGGAAAATTTGCGGGGAAGCAACATGTGATGTAGTTGGTGGTATTAAGGCTAACAGTCTTGCAATACTGACTGATGCAGCACATTTGCTTTCAGATGTTGCAGCATTTGCCATCTCCTTATTTTCTATATGGGCCGGGGGATGGGAACCGAATCCTCGTCAGTCGTTTGGATTTTTTCGAATTGAGATTCTTGGTGCTTTGGTTTCGATGCAGTTAATATGGCTACTTGCTGGAATTCTGGTATATGAAGCCATTTCTAGACTCATTGCAGGTCCACAAAATGTGGATGGTTTTTTAATGTTTGTAGTTGCGGCATTTGGTCTTGTGGTTAACATCATTATGGCTTTTGTATTGGGTCACGATCACGGACACGGACATGGACATGGACATGATCATCATCATGGTCGCAGCCATGCTATATCCGTTTCTACCAATCGTTATGTAAAGCATACAAACGATGAGCATCATCACACGGATGGCGATCACACTCACCATCATGATGATGAAAATCATTCGAAAGATGAATACCACCATACTCATGAAGATCATGTGCAAAGTCATAACCATGACATCCATAGAGAGGTTACTGAACCACTTCTTGGTGAATCAAATGGCATACCAGAGAAGACGAAGAAACGAAATATAAATGTACACGGAGCTTATCTCCACGTACTTGGGGACTCTATCCAGATAATTGTTTTGTTCACAACTATCAACATGCTGAGAAATATTTTGGAAGTCTTGATGGAGAGCACACCACGCGAGATAGATTCTACTCGACTTCAAAAGGGACTATTGGAGATGGAAGAAGTAGTAGCTGTTCATGAGCTGCACATATGGGCCATTACAGTTGGGAAGGTATTGCTAGCTTGTCATGTTAAAATCAATCCCGAAGCAGATGCTGACATGATGCTCGACAAGGTTATAGACTACATCAAGAGTGTTCATAGCATTAGTCATGTAACTATACAGATAGAACGCTAG 1050 0.4152 MEAPSAHHTQIIEISGELPDTGRKICGEATCDVVGGIKANSLAILTDAAHLLSDVAAFAISLFSIWAGGWEPNPRQSFGFFRIEILGALVSMQLIWLLAGILVYEAISRLIAGPQNVDGFLMFVVAAFGLVVNIIMAFVLGHDHGHGHGHGHDHHHGRSHAISVSTNRYVKHTNDEHHHTDGDHTHHHDDENHSKDEYHHTHEDHVQSHNHDIHREVTEPLLGESNGIPEKTKKRNINVHGAYLHVLGDSIQIIVLFTTINMLRNILEVLMESTPREIDSTRLQKGLLEMEEVVAVHELHIWAITVGKVLLACHVKINPEADADMMLDKVIDYIKSVHSISHVTIQIER 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02020 349 Pfam Cation efflux family 33 259 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Trre4g02020 349 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 278 348 IPR036837 -
Trre4g02020 349 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 30 253 - -
Trre4g02020 349 SUPERFAMILY Cation efflux protein transmembrane domain-like 30 271 IPR027469 -
Trre4g02020 349 Gene3D Cation efflux protein transmembrane domain 26 270 IPR027469 -
Trre4g02020 349 MobiDBLite consensus disorder prediction 174 212 - -
Trre4g02020 349 NCBIfam cation diffusion facilitator family transporter 32 252 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02020 Trre-Chr4 17086971 17088215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02020 1 349 Inorganic Solute Cotransporters AT2G46800 53.095 6.62e-122 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02020 K14689 - gmx:100794876 449.899