Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01983 ATGGATTCACCATTGGAGATTGATAAAGAGAATGAGAACAAAGGTAGTATGTGGGATTTGGAACAGAAAATTGACCAACCAATGGATGAAGAAGCAGGAAAACTCAGAAATATGTACAGAGAAAAAAAATTTTCTGCGCTTTTGCTTATACGGCTTGCATATCAGAGTCTCGGAGTAGTTTATGGAGATTTAGGAACTTCGCCTTTGTACGTTTTCTATAACACGTTTCCTCATGGAGTTGATAATTCGGAGGATGTGATTGGAGCTCTTTCTTTGATCATATATTCTCTTACTCTCGTGCCACTGCTCAAATATGTTTTTATCGTATTAAGAGCAAATGATAATGGTCAAGGTGGAACATTCGCTCTTTATTCCTTGCTATGCCGACATGCGAATATAAAAATCATACCCAACCAGCACCGTACAGATGAAGAGTTAACGACGTATAGCCGAACTACCTCCCACGAGAAGTCATTTGCGGCAAAAACTCAAAGATGGTTAGAGGGACAAGCATTTATTAAAAGTACCATTCTTATTCTTGTCCTTGTCGGTACCTGCATGGTGATTGGCGATGGTATTCTTACACCAGCTATATCTGTTTTATCTGCTGCTGGTGGCATCAAGGTGAATCGCCCGGAAATGGATAGCGGCGTGGTTGTGCTTGTTGCGGTTGTAATATTAGTTGGACTATTCAGCGTGCAACATTATGGTACCGATAGAGTTGCTTGGCTCTTTGCTCCAATTATTTTGCTTTGGCTTCTCTTAATTGGAGGTATAGGTATCTACAACCTCTCGAAATATGGTGGCAGTGTCCTAAAAGCCTTTTCACCTCTCTATGTGTATCGATATCTAAGAAACGGACACAAAAAAAGTTGGCTTTCCCTTGGTGGAATCTTGCTCAGCATAACAGGGACAGAAGCTCTCTTTGCCGACTTAGCCAGTTTTCCAGTCTCATCCGTACAAATTGCGTTTACTCTTGTTGTGTTTCCTTGCCTTCTTTTGGCATATTCTGGACAAGCTGCTTATCTGGTGAATAACTTGCATCATTCACAAGATGTTTTTTATCGATGTATTCCAGATAAAATATACTGGCCAGTATTTATTATTGCAACCCTAGCAGCAATAGTTGCAAGTCAAGCCACAATAACCGCAACCTTTTCAATCATTAAGCAAGCCCTTGCTCATGGATGTTTCCCAAGAGTCAAAGTCGTACATACATCGAAAAAGTACCTTGGTCAGATATATATTCCGGATATCAATTGGATACTTATGGTTCTTTGCATTGCCGTCACTGCCGGCTTTAAAAATCAAAGTCAGATTGGAAATGCTTATGGCACTGCGGTTGTGTTGGTTATGCTGGTTACAACACTGTTGATGATTTTGATCATGATATTAGTTTGGCACTGTCATTGGACTCTTGTCATTATATTCACCGGCTTATCATTGATTGTCGAATGCACATACTTCTCTGCTGTACTTTTCAAAGTCGATCAAGGTGGATGGGCCCCCCTTGCAATTGCCGGAATATTTTTGATTGTAATGTATGTTTGGCATTACGGTACAGTGAAGCGCTATGAGTTTGAATTGCATAGCAAAGTCTCAATGGCATGGATTCTCGGTCTCGGTCCTAGTTTAGGACTAGTTCGTGTCCCCGGAATTGGCCTAGTCTATACAGAGCTTGCAAGTGGAGTTCCGCACATATTTTCTCATTTCATTACAAACCTACCAGCACTCCATTCGGTTGTTGTTTTCGTGTGTGTGAAATATCTTCCTGTCTACACCGTCCCGGAAGAAGAACGTTTCCTTGTCAAACGTATCGGACCAAAGAATTACCACATTTTTCGATGCGTGGCACGATATGGATATAAAGACCTACATAAAAAAGACGATGATTTCGAGAAGAAACTCTTCCATAGCCTTTTCATGTTTGTTCGACTCGAGTCAATGATGGAAGGTTGCTCAGATTCAGAGTACAGCTTATGTGAACCGCAAACCGAACAATCAATAGAATTCATGTTAAATAACAACGGAAACGGAAACACAACTTCTATGAGTAATGTGGATTTTTCAATTTCATCGGTAGATTCAATAGTTCCTGCAAGATCACCATCACATGTGAATGTTGTTACTTTTCAATCTTCAAGTCATTGTACCGAGGTCGACGAACTTGAATTTTTAAACAGTTGTAGAGAAGCTGGTGTTGTTCACATTCTTGGAAACACAGTTGTGAGGGCTAGTAGGGATTCAAGATTCTACAAGAAAATAGCTGTTGATTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGTCATCTTCAATATTCCTCATGAGAGTCTCTTAAATGTTGGTCAAGTTTTCTATGTATAG 2376 0.3994 MDSPLEIDKENENKGSMWDLEQKIDQPMDEEAGKLRNMYREKKFSALLLIRLAYQSLGVVYGDLGTSPLYVFYNTFPHGVDNSEDVIGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTFALYSLLCRHANIKIIPNQHRTDEELTTYSRTTSHEKSFAAKTQRWLEGQAFIKSTILILVLVGTCMVIGDGILTPAISVLSAAGGIKVNRPEMDSGVVVLVAVVILVGLFSVQHYGTDRVAWLFAPIILLWLLLIGGIGIYNLSKYGGSVLKAFSPLYVYRYLRNGHKKSWLSLGGILLSITGTEALFADLASFPVSSVQIAFTLVVFPCLLLAYSGQAAYLVNNLHHSQDVFYRCIPDKIYWPVFIIATLAAIVASQATITATFSIIKQALAHGCFPRVKVVHTSKKYLGQIYIPDINWILMVLCIAVTAGFKNQSQIGNAYGTAVVLVMLVTTLLMILIMILVWHCHWTLVIIFTGLSLIVECTYFSAVLFKVDQGGWAPLAIAGIFLIVMYVWHYGTVKRYEFELHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPALHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNYHIFRCVARYGYKDLHKKDDDFEKKLFHSLFMFVRLESMMEGCSDSEYSLCEPQTEQSIEFMLNNNGNGNTTSMSNVDFSISSVDSIVPARSPSHVNVVTFQSSSHCTEVDELEFLNSCREAGVVHILGNTVVRASRDSRFYKKIAVDYIYAFLRKICRENSVIFNIPHESLLNVGQVFYV 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01983 791 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 39 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre4g01983 791 NCBIfam potassium uptake protein 52 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre4g01983 791 Pfam K+ potassium transporter 54 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01983 Trre-Chr4 16587842 16591664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01983 6 791 Inorganic Solute Cotransporters AT2G35060 76.172 0.0 1194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01983 K03549 - gmx:100776628 1261.51