Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01980 ATGTACTCATCAATTTCATCATCATCATCAAGAGGAGGATATGGTGGTGATGGTGGAGACATGAACATGAACATGAACATAGATATGGGTATGATGAATATGAAACCTGCATGGCTAGAGAGGTTGATGGGTGAAACATTCTTTGGTGATTGTGGGGTCCACAAAAATCAAAGGAAGAACGAGAAGAACATTTTTTGCTTACACTGTTGTCTTAGCATCTGCCCCCACTGTTTACCTTCTCATACCTCTCATCCTCTTCTCCAGGTGAGAAGGTATGTTTACCACAATGTAATTCGATTGGATGATCTGGAAAAGCTCATTGATTGTTCCAATATTCAGCCCTATACTATTAACAGTGCCAAAGTGATATTTTTAAATCAAAGGCCACAATCAAGGTCATGCAAAGGTACAACCAATGCTTGCTTCACTTGTGACAGGATTCTTCAGGACCCATTCCATTTTTGTTCTCTCTCATGCAAGGTAGATTTCATGGTGTACCAAGGTCAAAGTTTGTCCAACATTTTACATCGATTTGATGAATCTGACTTTGCAATATCACAATTCGAGGGACTAAGAGTGGATGGATCTGAGGTAATTGATGAAGATAACAATCTCAACCACATTGGCCCAAGTTCTTCTAATTACTCCATTAATGCCCATGATCAAGATCATGTCATCACTAGCACCAAGAAGAAGAACAAATCCAATAGATATCTCCCTGGCATTGTCCTTTCTCTTGGAAGTAGAAGAAAAGGTGCTCCTCAAAGGGCCCCTCTTTTATAA 783 0.3972 MYSSISSSSSRGGYGGDGGDMNMNMNIDMGMMNMKPAWLERLMGETFFGDCGVHKNQRKNEKNIFCLHCCLSICPHCLPSHTSHPLLQVRRYVYHNVIRLDDLEKLIDCSNIQPYTINSAKVIFLNQRPQSRSCKGTTNACFTCDRILQDPFHFCSLSCKVDFMVYQGQSLSNILHRFDESDFAISQFEGLRVDGSEVIDEDNNLNHIGPSSSNYSINAHDQDHVITSTKKKNKSNRYLPGIVLSLGSRRKGAPQRAPLL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01980 260 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 33 259 - -
Trre4g01980 260 Pfam PLATZ transcription factor 90 161 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01980 Trre-Chr4 16526973 16534664 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre4g01980 PLATZ 8.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01980 - - ccaj:109804478 382.104