Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01973 ATGGATATATATATATATACTTTTATTGTCATTGCATCAAACAATCATGTTGAAATTCATTCATTTGTTGACGTGAACCAAATATATAATGACAATGATGGTGCTGATGATGATGAAGAGGAGGACGACGATGATAACAACAATAATGTGCAAATTTTTCAAGAAGTTTGTATTGATCATGTGGGAGCTTATGTTCTGTATGCTCCAATAGCTACAAGAAATATGCATAAGATCTTAAATGAAGAGAACTCGTCAGATTTTGGAATTCTTCGCTGGGGTTTCATGATCTCACGAGATGGACATCTTGATGCTGATGTTACATCTGGAAGTGATCATCATAGACAAAAGGGATCATTGTTAACATTGTCTTTCCAAGTTTCAGTTCCTGTTGAAGCACAATTAGGAGTAACCATGGAACGTTTAAATTCAATATTCACCATAACAATTGGAAAGATTCAGACTGCTTTGGATTGTGACGATGATGATTCCCTAAAAACATGA 501 0.3453 MDIYIYTFIVIASNNHVEIHSFVDVNQIYNDNDGADDDEEEDDDDNNNNVQIFQEVCIDHVGAYVLYAPIATRNMHKILNEENSSDFGILRWGFMISRDGHLDADVTSGSDHHRQKGSLLTLSFQVSVPVEAQLGVTMERLNSIFTITIGKIQTALDCDDDDSLKT 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01973 166 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 45 156 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01973 Trre-Chr4 16432241 16432741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01973 46 159 Homeobox Transcription Factor Family AT3G61150 30.400 9.93e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01973 K09338 - twl:119995606 79.3369