Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01914 ATGGCTCATTTTCAGATGTGTCCACCTGAGTCACACGCTACAAAGACTACACCAAATCTTACAAAAAAAAGAAAACGCGAAGATACATTTGTGGTTGATGAAGAATATAGTTTAGATGATGCGAAAGAATCCGAGGAAAATCAGTCACCATTTTTAAGTGTTGCGAAAAGTGCTATGCGCGAAATATTACGACTCACGTCTAATACTGATAAATCCTTATGGAGAAACAATATAAATGAAGAAGTTGGATTTATTCTTGATCGGAAAAGGTATATAAATTTGAATTCAATATTTTCAAAATTGATATCTTCCGATAGGCGTGAAGAGTCTTCGAAAGCAGAGCTGATAGTCCGGAGCAGCGGAAAACATTTGGTCGAATTGATTTTAGATTCGGAAAAATGGGCAAAATTGTTTCCAACAATTGTTTCAAATGCTAGAACTGTGAAAGTATTTAATGCTGGTGCACCTGGAAATCGAAATGGAGCCTTACAAGCGATGGTTGGAGAAGTGCACATCCTTTCACCCTTGGTACCACCTCGAGAGTTCTACTTCATCCGTTATTGTCGACAATTTAGCGATAGGGATTGGGTGATAGTTGACATGTCAGGTGATTTACTATTCGAGCGCGCTAATATTCGTAATCCGGCTTACAAACTTCCATCTGGGTGTTTGATTCGTGAAATGCCTGATGGAAAATCTAAGGTTACTTGGGTTGAGCATGTGATGGTGAATGAAATGAGCCAAGAACTGATGCTATACAAAGATCTCATTTATGAGTATAATCCTTTTGGAGCAAAACTATGGCTTTACGCACTTCAAAGAATGTGTAACATCCCTAAACTTTAA 846 0.3806 MAHFQMCPPESHATKTTPNLTKKRKREDTFVVDEEYSLDDAKESEENQSPFLSVAKSAMREILRLTSNTDKSLWRNNINEEVGFILDRKRYINLNSIFSKLISSDRREESSKAELIVRSSGKHLVELILDSEKWAKLFPTIVSNARTVKVFNAGAPGNRNGALQAMVGEVHILSPLVPPREFYFIRYCRQFSDRDWVIVDMSGDLLFERANIRNPAYKLPSGCLIREMPDGKSKVTWVEHVMVNEMSQELMLYKDLIYEYNPFGAKLWLYALQRMCNIPKL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01914 281 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 35 277 IPR042160 -
Trre4g01914 281 MobiDBLite consensus disorder prediction 1 26 - -
Trre4g01914 281 Gene3D - 51 256 IPR023393 -
Trre4g01914 281 SMART START_1 53 278 IPR002913 GO:0008289
Trre4g01914 281 SUPERFAMILY Bet v1-like 50 276 - -
Trre4g01914 281 ProSiteProfiles START domain profile. 44 277 IPR002913 GO:0008289
Trre4g01914 281 Pfam START domain 111 277 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01914 Trre-Chr4 16059830 16060983 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01914 44 276 Homeobox Transcription Factor Family AT3G03260 38.298 5.18e-47 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01914 K09338 - jre:108988074 198.749