Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01913 ATGTGTGAGAAAAATTACTTTTCTTCAATTGAGTATTTTCCCAAACATGAAAATGATAGAGAGGTTAGGTCAAAGGAAGGGAGAAAAAGTGTGATGAACCTTTCTAATCGAATGATTCAAAGCTTTTGCAAAGATTTGAACAGGGCAAAGATGAACCATATTTTGACACATGACACAAGTGAATATAAGATTCATTTAACTTCAGAGATTACTAACCCTAATGCAATTCGTTTGAAATGTCGCTCCAATTCAAATGGCATGGTTGTCACTACAACGGGATCTGTTAGGCTTCATGTTCCTCCACAAACTATTTTTCACTTTCTTAGTGATGAAAGAAGACGACAAGAGTGGGACAGTCTTGTTGGTGAAAGAGAAGTGCATGAAGTTGCCTACATCTCAATAGGAGAAAGAGAAATTCAATCTTACAACCGCATTTCAATTCTTGAGATATATAATGATGATGATGGTGCTGCTGATGATGATGATGGTGATGATGAGGAGGAGGATGAGGAGGAGAAGGATGACGACAATAACAACAACAATGTGCAAATTTTTCAAGAAGTTTGTATTGATCCTGTGGGAGCTTATGTTGTGTATACTCCAGTGAGTACAAGAAATATGCACAAGATCTTAAATGAAGAGGATTCATCAGATTTTGGAATTCTTCCTTGGGGTTTTATGATCTCAAAAGATGGACATGTTGATGCTGATGTTACATCTGAAAGTGATCATCATAGAAAAAAGGGATCATTAGTAACATTTTCTTTCCAAGTTTTAGTTCCTGCTGAAGCACCACTAGGAGTAACATTGGAACGGTTAAATTCAATATTCACCACAACAATTGAAAAGATTCAGAATGCTTTGGATTGTGAACATGATGATTAA 885 0.3605 MCEKNYFSSIEYFPKHENDREVRSKEGRKSVMNLSNRMIQSFCKDLNRAKMNHILTHDTSEYKIHLTSEITNPNAIRLKCRSNSNGMVVTTTGSVRLHVPPQTIFHFLSDERRRQEWDSLVGEREVHEVAYISIGEREIQSYNRISILEIYNDDDGAADDDDGDDEEEDEEEKDDDNNNNNVQIFQEVCIDPVGAYVVYTPVSTRNMHKILNEEDSSDFGILPWGFMISKDGHVDADVTSESDHHRKKGSLVTFSFQVLVPAEAPLGVTLERLNSIFTTTIEKIQNALDCEHDD 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01913 294 MobiDBLite consensus disorder prediction 153 181 - -
Trre4g01913 294 Gene3D - 17 130 IPR023393 -
Trre4g01913 294 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 8 288 IPR042160 -
Trre4g01913 294 SUPERFAMILY Bet v1-like 26 129 - -
Trre4g01913 294 MobiDBLite consensus disorder prediction 153 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01913 Trre-Chr4 16054630 16057794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01913 22 290 Homeobox Transcription Factor Family AT1G17920 31.022 1.62e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01913 K09338 - aprc:113852280 159.844