Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01911 ATGTCACCCTTATTCTATTACTCTCTCCTCTCTCTAACCTTTATCATAACCATCAAAATTTTACTCCAAATCCAATCAAGAAGGTTTAAAAACCTTCCACCAGGTCCACCAACAATCCCTATAATTGGCAACCTCCACCTCCTAAAACACCCTTTCCACCGTACCTTCACAACCTTATCACAAAAATACGGCGATGCGGTTTCACTTTGGTTCGGTTCGAGCCTAGTTGTTGTTATCTCTTCGCCTTCTTTAGTCCAACAATGCTTTACTCAAAACGACATTGTTTTAGCTAACCGACCACGGTTCCTAACTGGAAAACACATCTTTTACGATTACACCACTTTAGGCTCCGTTTCTTACGGAGACCATTGGCGTAATCTACGTCGTATTATAACTATTGATGTTCTCTCTAACAACCGTCTTAACTCCTTTTTAGGAGTTCGAAGTGACGAAACAAATAGACTTGTACAAAAGCTTCTCAAAGATACCACCTCTGAAGATTTCAGTTTCACGAAGGTGGAACTGAGATCTAGACTAACAGAGATGACGTTTAATGCTATGATGAGAATGATATCAGGGAAACGGTATTATGGAGATGACGGAGACGTTATAGATGTTGAAGAAGCGAAACAATTTACGGAAATAATAAGTGAGATAATGTCTTTGTTAGGTGCTAATAATAAAGGTGATTTTTTGCCTTTGTTAAGGTGGTTTGATCTTGATAATTTGGAGAAGAGGTGCAAAAGGATTGCAAAAAGAGCTGATGCATTTTTGGAGGGACTTATTGAGGATCATCGCAATGGAAATCATAGTGATGGAAATAGAACTATGATTTATAATCTTTTGAAGCTAAGTGAAATACAACCCGAGTATTATTCTGATCACATAATCAAAGGTCTTATTCAGGGTATGCTTCTTGCCGGAACAGACACGTCAGCTGTGACAATAGAATGGGTAATGTCTGAATTACTAAATCATCCAGAAGTATTAAACAAAGCAAAGGAAGAATTAGACACACAAATTGGAAAAAATAAATTAATAGATGAACAAGATTTATCAAAACTTCCATATCTACAAAACATAATCTCCGAGACACTTAGACTACATCCACCAGCTCCACTACTATTACCACATTATTCTTCAGACGATTTTAGCCTTGGAGAATTCAATGTTCCAAAAGATACTATAATATTAACTAATGTTTGGGCCATTCATAGAGATCCAACACTTTGGGAGGATGCTTTGAGTTTTAAGCCCGAGAGATTTGAAAAAGAAGGCGAGGTGAATAAATTGATGGCATTTGGATTAGGAAGAAGGGCTTGCCCTGGATTAAGTTTGGCCCAACGGACTGTGGGCTTTACCGTGGGCTTGTTGATCCAATGCTTTGAATGGAAAAGAGAGAGTAAGGAAAAACTTGATATGATGGAGGATAAAGGAATTACAATGCCAAAGAAGATTCCATTAAGGGTCATGTGTAAAGCATTGCCTATTGGCAATGATGTTATGAAGTGA 1512 0.3783 MSPLFYYSLLSLTFIITIKILLQIQSRRFKNLPPGPPTIPIIGNLHLLKHPFHRTFTTLSQKYGDAVSLWFGSSLVVVISSPSLVQQCFTQNDIVLANRPRFLTGKHIFYDYTTLGSVSYGDHWRNLRRIITIDVLSNNRLNSFLGVRSDETNRLVQKLLKDTTSEDFSFTKVELRSRLTEMTFNAMMRMISGKRYYGDDGDVIDVEEAKQFTEIISEIMSLLGANNKGDFLPLLRWFDLDNLEKRCKRIAKRADAFLEGLIEDHRNGNHSDGNRTMIYNLLKLSEIQPEYYSDHIIKGLIQGMLLAGTDTSAVTIEWVMSELLNHPEVLNKAKEELDTQIGKNKLIDEQDLSKLPYLQNIISETLRLHPPAPLLLPHYSSDDFSLGEFNVPKDTIILTNVWAIHRDPTLWEDALSFKPERFEKEGEVNKLMAFGLGRRACPGLSLAQRTVGFTVGLLIQCFEWKRESKEKLDMMEDKGITMPKKIPLRVMCKALPIGNDVMK 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01911 503 SUPERFAMILY Cytochrome P450 33 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01911 503 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01911 503 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01911 503 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01911 503 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01911 503 Pfam Cytochrome P450 33 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01911 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Trre4g01911 503 CDD CYP81 64 488 - -
Trre4g01911 503 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01911 503 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01911 503 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01911 503 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01911 503 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01911 503 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01911 503 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01911 503 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01911 503 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01911 503 PANTHER CYTOCHROME P450 82C3-RELATED 14 493 - -
Trre4g01911 503 FunFam Cytochrome P450 family protein 24 497 - -
Trre4g01911 503 Gene3D Cytochrome P450 19 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01911 Trre-Chr4 16008831 16010705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01911 9 496 Cytochrome P450 AT4G37370 53.564 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01911 K13260 - ccaj:109806032 693.73