Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01900 ATGATGGAGAAAGCAATGGTGGTGTTGAATAGTTTAGCAGGAATTGAAGAAGGTAAGGAAGCTATTGTTGAAGAAGGTGGAATAGCTGCTCTTGTTGAAGCCATTGAAGATGGGTCTGTGAAAGGAATGGAATTTGCGGTTTTAACTCTTCTTCAGCTTTGTGCTGAGAGTGTTACAAACAGAGGGTTACTTGATAGAGAAGGTGGAATTCCTCCTCTTGTAGCTCTTTTTCAGAATGGAACTCTTCGAGCTAAGCATAAGGCTGATACGCTCCTTCGATACTTGAGAGAATCAAGACAAGAAGCATCAACTTCGACCATAAAGCTTGTAACACTCTAG 339 0.413 MMEKAMVVLNSLAGIEEGKEAIVEEGGIAALVEAIEDGSVKGMEFAVLTLLQLCAESVTNRGLLDREGGIPPLVALFQNGTLRAKHKADTLLRYLRESRQEASTSTIKLVTL 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01900 112 SUPERFAMILY ARM repeat 3 103 IPR016024 -
Trre4g01900 112 Gene3D - 1 109 IPR011989 -
Trre4g01900 112 PANTHER U BOX DOMAIN-CONTAINING 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01900 Trre-Chr4 15875159 15876108 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01900 1 100 U-box Gene Family AT5G67340 55.000 4.50e-26 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01900 - - tpra:123898555 189.889