Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01786 ATGACTACTTTTGTGTATGCTTTGTTGGCCAAGAAATGTATAAGTGAAAATCTTTGGAATCAAAAAGTTGATGTCTTTAAGAAATGGGGTTGGTCTGATGAAGCTGTTTTTCAAGCATTTAGGTCATATCCTAGTTTGATGTTGTTTTCAACTGATAAGGTTAATTTGGTGATGACTTTTTGGGTCAATCAATTGGGTTGGAATTCCTTGTCACTTACTAAATATCCAAATATGTTTGGTTATAGTTTACATAAAAGGGTCATTCCAAGAGCTTCAGTTTTGCAATTTCTTTTGATGAAAGGTCTGCGAAAAAAGAATGCAAGCTTAGTTTCACCATTTACTTGTTCTGAGAAGTTGTTCTTGAGCAAGTTTGTTTTTAGCTTTAAGGAGGAGTCGGATTATTTATTAAAGCTATATGAGGACAACATGAAACTTGCATACACAAAGGAGGAGGACAAAGGCACACCATTCACTAAATAG 480 0.3438 MTTFVYALLAKKCISENLWNQKVDVFKKWGWSDEAVFQAFRSYPSLMLFSTDKVNLVMTFWVNQLGWNSLSLTKYPNMFGYSLHKRVIPRASVLQFLLMKGLRKKNASLVSPFTCSEKLFLSKFVFSFKEESDYLLKLYEDNMKLAYTKEEDKGTPFTK 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01786 159 Gene3D Transcription termination factor 3, mitochondrial 6 137 IPR038538 -
Trre4g01786 159 SMART mt_12 69 103 IPR003690 GO:0003690|GO:0006355
Trre4g01786 159 SMART mt_12 37 68 IPR003690 GO:0003690|GO:0006355
Trre4g01786 159 PANTHER CGI-12 PROTEIN-RELATED 3 129 IPR003690 GO:0003690|GO:0006355
Trre4g01786 159 Pfam mTERF 15 121 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01786 Trre-Chr4 14817504 14817983 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre4g01786 mTERF 1.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01786 K15032 - gmx:102661928 181.415