Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01783 ATGGTTTCTAGGATACTGCACAACCACATCACAACCATTTCCAGTATCATACCTCATCAACAATTTCGGTTTCTCACCACAATCAGCTCTCGCAGCTTTCAACCACAAGCAGCTGCAAACCCTGCAATTTTACAAAGTAGCATGGAGAAAAGAATAATCCCTCTTTTTGAATTGTTAAGTGGGTTTTTGAAAACCAACAAGGATGTTATTGTTTGCTTAATTCGACATTCGACTGCATTTAGGATGAATACCTATCCCCGTTTGCTGGTTAATATCAATTTGATGACTGATTTTGGAGTTTGTGATTCTAACATAGCTAGATTACTTCAAGAAAGGCCGTCTATATTTGGTTCAAATGATTTGATTAAGTCGTTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCTATGACTACTTTTGGGACTGCTTTGATGGCCAAGAAATGTATAAGTGAAGAACTTTGGAATCAGAAAGTTGATGTCTTTAAGAAATGGGGTTGGTCTGATGAAGAGTTTTTTCAAGCATTTAGGTCATATCCTAGTTTGATGTTGGCTTCAATTGATAAGGTTAATTTGGTGATGAGTTTTTGGGTTAATCAATTGGGTTGGAATTCCTTGGCAGTTACTAAATGTCCAAATATGTTTGCTTATAGTTTACATAAAAGGATCATTCCAAGAGCCTCAGTTTTGCATTATCTTTTGATGAAAGGTCTGTGA 717 0.3654 MVSRILHNHITTISSIIPHQQFRFLTTISSRSFQPQAAANPAILQSSMEKRIIPLFELLSGFLKTNKDVIVCLIRHSTAFRMNTYPRLLVNINLMTDFGVCDSNIARLLQERPSIFGSNDLIKSLEEVKGLGFDPSMTTFGTALMAKKCISEELWNQKVDVFKKWGWSDEEFFQAFRSYPSLMLASIDKVNLVMSFWVNQLGWNSLAVTKCPNMFAYSLHKRIIPRASVLHYLLMKGL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01783 238 SMART mt_12 106 134 IPR003690 GO:0003690|GO:0006355
Trre4g01783 238 SMART mt_12 173 204 IPR003690 GO:0003690|GO:0006355
Trre4g01783 238 SMART mt_12 34 65 IPR003690 GO:0003690|GO:0006355
Trre4g01783 238 SMART mt_12 205 236 IPR003690 GO:0003690|GO:0006355
Trre4g01783 238 Gene3D Transcription termination factor 3, mitochondrial 22 238 IPR038538 -
Trre4g01783 238 PANTHER CGI-12 PROTEIN-RELATED 37 237 IPR003690 GO:0003690|GO:0006355
Trre4g01783 238 Pfam mTERF 150 231 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01783 Trre-Chr4 14802316 14803293 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre4g01783 mTERF 4.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01783 K15032 - mtr:25488156 206.068