Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01776 ATGTTGAAAAAATGGTTTCTCTCCCAGAGTGTGGTTTTAGTAGGTATCATCAACCCAACAAATTCAGTAACCCCAAAATTCAATCTTCTTCTTCCCCAATTTTCATTCAGATATTATTGCAGCACAACAACAACCACATCACAATCACAATCAGACACAAATCCATTACCTGTTTCATACCTCATCAACAATTTTGGTTTCTCACATGAATCTGCTCTCAAAGCTTTCAACCAAAAACATGTTCGTTTCAATACCCTTGAAAAGCCTAATTCAGTTATCACCTTCTTCAAAAACCATGGTTTTTCACAATCCAACATACGCACCATCATCAGAAAAGCACCATGGTTACTTTCATCAGAACCCAACAATAAAATTTTGCGAAAGTTTCAATTTTTTTTATCAAAAGGTGTTTCTTCCTCTCATATTGTTTCATTGTTAACTGCAAACCCTAAAATTTTACAAAGTAGCTTGGAGAAACGAATAATCCCTCGTTTTGAATTATTAAGTAAGTTCTTGAAAACCAACAAGGATGTCATTGTTTGCTTAATTTTGCATTGGAGTTTATTTGTTCGTACTCCATATGACAATATTGTGGCTAATATCAATTTGATGACTGATTTTGGAGTTTGTGATTCTAACATAGCTAGATTGCTTCAACAAAGGCCGTCTATATTTAGTTCAACTGATTTGCTTAAGTCATTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCAATGACTACTTTTGAAGCTGCTTTGATGGCCAAGAAATGTATGACTAAAAAACTTTGGAATCAGAAAGTTGATGTCTTTAAGAAATGGGGTTGGTCTGATGAAGTTGTTTTACAAGCATTTAGGTCATATCCTTGTTTGATGTTGGTTTCAATTGATAAGTTTGGAGAAAAGGGTCATTCCAAGGGCCTCAATTTTACAATTTCTTTTGATGAAAGGAAAAAATGGAACTTGCATACACAAAGGAAAACAATGGCATGCCACTCACTATATAGGGTATGTTCAAGAAATGGTGTTAGTTCTCCTTCCCATGTTTATTCCATCAAGAATCCATAA 1068 0.3455 MLKKWFLSQSVVLVGIINPTNSVTPKFNLLLPQFSFRYYCSTTTTTSQSQSDTNPLPVSYLINNFGFSHESALKAFNQKHVRFNTLEKPNSVITFFKNHGFSQSNIRTIIRKAPWLLSSEPNNKILRKFQFFLSKGVSSSHIVSLLTANPKILQSSLEKRIIPRFELLSKFLKTNKDVIVCLILHWSLFVRTPYDNIVANINLMTDFGVCDSNIARLLQQRPSIFSSTDLLKSLEEVKGLGFDPSMTTFEAALMAKKCMTKKLWNQKVDVFKKWGWSDEVVLQAFRSYPCLMLVSIDKFGEKGHSKGLNFTISFDERKKWNLHTQRKTMACHSLYRVCSRNGVSSPSHVYSIKNP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01776 355 PANTHER CGI-12 PROTEIN-RELATED 58 300 IPR003690 GO:0003690|GO:0006355
Trre4g01776 355 Gene3D Transcription termination factor 3, mitochondrial 61 193 IPR038538 -
Trre4g01776 355 SMART mt_12 107 138 IPR003690 GO:0003690|GO:0006355
Trre4g01776 355 SMART mt_12 215 243 IPR003690 GO:0003690|GO:0006355
Trre4g01776 355 SMART mt_12 143 174 IPR003690 GO:0003690|GO:0006355
Trre4g01776 355 Pfam mTERF 94 298 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01776 Trre-Chr4 14754031 14755546 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre4g01776 mTERF 3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01776 K15032 - mtr:25488156 250.751