Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01770 ATGGGTTTCCGTTTGAATGTTATTCGACGGGCCAACCAAACAGCATCAAAATCTGCAGAAGTTCCAAAGGGCTATGTTGCAGTGTATGTTGGAGAGAAACAGAAGCAATTTGTGATCCCAATATCATATTTGAACCAACCATCATTTCAAGACTTATTGAGTCAAGCTGAGGAAGAGTTTGGATACGATCATCCCATGGGTGGCCTCACCATTCCTTGCACTGAAGATGTTTTTCAACACATAACTTCTCGCTTGAATGAGCTATGA 267 0.4157 MGFRLNVIRRANQTASKSAEVPKGYVAVYVGEKQKQFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCTEDVFQHITSRLNEL 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01770 88 Pfam Auxin responsive protein 13 85 IPR003676 GO:0009733
Trre4g01770 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01770 Trre-Chr4 14704629 14704895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01770 13 81 Calmodulin-binding Proteins AT3G43120 46.377 3.83e-18 72.4