Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01766 ATGTTCAATACACCATCACCTTATCACTATCTCAAGAACCACTTAACATTCCCTCTTATCATCCATCACTTTCCATCACCATGTTCTCTGCATTCTTCCACAAAAACTTCTGATGATTCAACCTCTTTTGCAGTATCCTACCTCATCAACACTTTTGACTTCTCCCCACAATTTGCTTCCAAACTCTGCAACACTTACGATATTCGTTTCAAGACTGCAGAAAACCCTGATTATGTTCTCAACTTCTTTAAAAACAATGGTTTCTCAGATACCCAATTACGTTATATGATTCCCAAGGCACCATGGCTTCTTTCCTGCAATCTCTCTTTAAGGGTCATCCCAAAGTTTCAATTTTTTCTCTCCAAAGGTGCTTCTAAAGCTGACATTTTTAAACTTATCAGTAAGTACCCTATGGTTCTGTCTCCAAGCTTGGAGAATCATACAATCCCAACCTATGAATTGTTGTATAGATTCATGAAATCAGATAAGAAAACTATTGCTCTTGTAATTCATAAACCATATTTACTTAGTTCTCATCTTGTGTCACATAACATCAAAATGTTGGTTGATATTGGAGTTAAGGACTCAACTATTATAAGATTGCTTGAGCTTCGGAACTGTACTCGGTTATTCCAGTCAAATCACATTTCGAAGTTGGTGGAGGAAGTAAAGAATTCAGGGTTTAATCCTTCAAGAACAACTTTTGTTATTGCATTGATTGCCAGAGAAAACAAACTATCATGGAAAGAGAAAGTTGATACCTTTAAGAAATGGGGTTGGTCTGATGAAGATGTTATAGAAGCATTTAAAAAGCAGCCTCATTGTATGTTAACATCCATTGATAAAATTAATTCAGTGATGAATTTTTGGGTCAATCAAATGGGTTGGGATGCTCGCGCCATTGCCAAAGCACCACATATTTTGTCGTTAAGTTTGGAAAAAAGGATCACTACAAGGGCACCAGTTGTGCAATTTTTGCTAGAGAGTGGTCTGCAAAAAGAGAATGCAAGCTTAACTTATCCATTTGTAGTGTCTGAGAAGTTGTTTCGTGATGCGTATTTAAAACGTTATAAGGAGGAGTCTTATCTATTAAAGTTGTATGAGGAAAAACTCGATCTTGCATCCACGGACAAAAATGGCATGCGATGA 1149 0.3673 MFNTPSPYHYLKNHLTFPLIIHHFPSPCSLHSSTKTSDDSTSFAVSYLINTFDFSPQFASKLCNTYDIRFKTAENPDYVLNFFKNNGFSDTQLRYMIPKAPWLLSCNLSLRVIPKFQFFLSKGASKADIFKLISKYPMVLSPSLENHTIPTYELLYRFMKSDKKTIALVIHKPYLLSSHLVSHNIKMLVDIGVKDSTIIRLLELRNCTRLFQSNHISKLVEEVKNSGFNPSRTTFVIALIARENKLSWKEKVDTFKKWGWSDEDVIEAFKKQPHCMLTSIDKINSVMNFWVNQMGWDARAIAKAPHILSLSLEKRITTRAPVVQFLLESGLQKENASLTYPFVVSEKLFRDAYLKRYKEESYLLKLYEEKLDLASTDKNGMR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01766 382 Pfam mTERF 248 349 IPR003690 GO:0003690|GO:0006355
Trre4g01766 382 Pfam mTERF 80 241 IPR003690 GO:0003690|GO:0006355
Trre4g01766 382 PANTHER CGI-12 PROTEIN-RELATED 40 360 IPR003690 GO:0003690|GO:0006355
Trre4g01766 382 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Trre4g01766 382 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Trre4g01766 382 SMART mt_12 298 332 IPR003690 GO:0003690|GO:0006355
Trre4g01766 382 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Trre4g01766 382 SMART mt_12 166 194 IPR003690 GO:0003690|GO:0006355
Trre4g01766 382 FunFam Mitochondrial transcription termination factor-like 144 361 - -
Trre4g01766 382 Gene3D Transcription termination factor 3, mitochondrial 173 363 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01766 Trre-Chr4 14692581 14693729 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre4g01766 mTERF 9.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01766 K15032 - mtr:25488156 428.328