Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01765 ATGCTACACCAACCCTTTTCTTCTTCTTCATCTTCATATTCATATTCATCCATTTCTACATTTTTTCCACTTCAAATCAAATCTAAATGTAAATCTTTTCAATTGTTCAATACACCACCACCTTATCTCTATCTCAAAAACAACAACTTCACTTTCCCTCTTATCATCCATCACTACCCATCACCATGTTCTCTGCATTTTTCCACCAACACTTCTGATAATTCAACCTCATTTGCAGTATCCTACCTCATCAACACTTTTAACTTCTCTTCAAAATTTGCTTCCAAACTCTGCTCCACTTACGATGTTCGTTTCCAAACTGCAGAAAACCCTGATTCTGTTCTCAACTTCTTCAAAAACAATGGTTTCTCAGAAACCCAATTGCGTTATATGATTCCCAAGGCACCATGGCTTCTTTCCTGCAATCTCTCCTTAAGGGTCATCCCAAAGTTTGAATTTTTACTATCAAAAGGTGCTTCTAAATCTGACATTGTTAACATTGTTAGTAAGAACCCTATGGTTCTGTCTCCAAGCTTGGAGAATCATACAGTTCCAACCTATGAATTGCTTTATAGATTCATGAAATCAGATAAGAAAACTATTGCTCTTGTAATTCACAAACCATATTTACTTACTTCTCATTCTGTGTCATATAACATCAATTTGTTGCTTGATATTGGAGTTAAGGACTCAACTATTATTAGATTGTTTGAGCTTCGGAACTGTACTCGGTTATTACAGACAAATCACTTGCCGAAGTTGGTGGAGGAATTAAAGAATTCAGGGTTTACTCCTTCAAAAACATTTTTTGTTATAGCATTGCTTGCAAAAACATCGGTAACCAAAACCTTGTGGAATGAGAAAGTTGATGCCTATAAGAAGTGGGGTTGGTCTGATGAAGATGTTTTAGAAGCATTTAGAAAGAATCCTCATTGTATGTTAACATCCATTCATAAAATTAATTCAGTGATGAATTTTTGGGTCAACCAAATGGATTGGGATGCTCGCGCTATTGCCAAAGCACCACATATTTTGTTGTTAAGTTTGGAAAAAAGGATCACTCCAAGGGCCCTCGTTGTGCAATTTTTGTTTGAGAGTGGTCTGATAAAAAAGAAGGCAAGCTTAACTTATCCATTTGTGGTGTCTGAGAAACAAAAATGGCATGCGATGATCAGATTTTTCAGAGTTAATTCCGGTGGTGATTGA 1206 0.3607 MLHQPFSSSSSSYSYSSISTFFPLQIKSKCKSFQLFNTPPPYLYLKNNNFTFPLIIHHYPSPCSLHFSTNTSDNSTSFAVSYLINTFNFSSKFASKLCSTYDVRFQTAENPDSVLNFFKNNGFSETQLRYMIPKAPWLLSCNLSLRVIPKFEFLLSKGASKSDIVNIVSKNPMVLSPSLENHTVPTYELLYRFMKSDKKTIALVIHKPYLLTSHSVSYNINLLLDIGVKDSTIIRLFELRNCTRLLQTNHLPKLVEELKNSGFTPSKTFFVIALLAKTSVTKTLWNEKVDAYKKWGWSDEDVLEAFRKNPHCMLTSIHKINSVMNFWVNQMDWDARAIAKAPHILLLSLEKRITPRALVVQFLFESGLIKKKASLTYPFVVSEKQKWHAMIRFFRVNSGGD 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01765 401 FunFam Mitochondrial transcription termination factor-like 179 389 - -
Trre4g01765 401 Gene3D Transcription termination factor 3, mitochondrial 213 385 IPR038538 -
Trre4g01765 401 SMART mt_12 165 196 IPR003690 GO:0003690|GO:0006355
Trre4g01765 401 SMART mt_12 303 334 IPR003690 GO:0003690|GO:0006355
Trre4g01765 401 SMART mt_12 201 229 IPR003690 GO:0003690|GO:0006355
Trre4g01765 401 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Trre4g01765 401 SMART mt_12 335 369 IPR003690 GO:0003690|GO:0006355
Trre4g01765 401 PANTHER CGI-12 PROTEIN-RELATED 75 385 IPR003690 GO:0003690|GO:0006355
Trre4g01765 401 Pfam mTERF 250 383 IPR003690 GO:0003690|GO:0006355
Trre4g01765 401 Pfam mTERF 115 312 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01765 Trre-Chr4 14684956 14688219 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre4g01765 mTERF 7.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01765 K15032 - mtr:25488156 413.305