Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01763 ATGTTCAATACACCACCACCTTATCTCTATCTCAAAAACAACTTAACTTTCCCTCTTATCATCCATCACTTTCCATCACCATCTTCTCTGCATTCTTCCACCAAAACTTCTGGTTATTCAACCTCTTTTGCAGTATCCTACCTCATCAACACTTTTGACCTCTCCCCAAAAGTTGCTTCCAAACTCTGCTCAACTTACTATATTTGTTTCGAGACTGCAGAAAAACCTGATTATGTTCTCAACTTCTTTAGAAACAATGGTTTCTCAGATACCCAATTACGTTATATGATTCCCAAGGCACCATGGCTACTTTCCTGCAACCTCTCCTTAAGGGTCATCCCAAAGTTTGAATTTTTACTCTCCAAAGGTGCTTCTAAATCTGACATTGTTAAACTTATCAGTAAGTACCCTATGATTCTGTCTCCAAGCTTGGAGAATCATATAGTCCCAACCTATGAATTGCTTTATAGATTCATGAAATCAGATAAGAAAACTATTGCTCTTGTAATTAACAAACCATATTTACTTATTTTCCATCTTGTTTCACATAACATCAAAACGTTAGTTGATACTGGAGTGCCGGACTTAACTATTACAAGGTTGCTTCAGCTTCGGAACCCATTTACTCGGTTATTTCATACAACTGAAATGCCAAAGTTGGTGGAGGAATTAAAGAATTCAGGGTTTGATCCTTCAAAAGCAAATTTTGGTTTAGCATTGCTTGCTTGGGGAAAAAAACTATCATGGAATGAGAAAGTTGATGCCTATAAGAAGTGGGGGTGGTCTGATGAAGATGTTTTAGAAGCATTTCGAAAGAATCCTTGTTGTATGTTAACATCCATTGATAAAATTAATTCACTGATGGATTTTTGGGTCAATAAAATGGGTTGGGATGCTCGCGCCATTGCCAAAGCACCACATATTTTGCCGTTAAGTTTGGAAAAAAGAATCATTCCAAGGGCCCCCGTTGTGCAATTTCTTCTGGAGAAAGGTTTGCGAAAAAAGAATGCAAGCTTAACTTATCCATTTTTTATGCATGAGAAGTTGTTTCGTGATGGATATTTAAAACGTCATAAGGAGGGGTCTTATCTATTAAAGTTGTATGATGAAAAACTCAATCTTGCCTACACCACCGACAAAAATGGCATGCGATGA 1155 0.3723 MFNTPPPYLYLKNNLTFPLIIHHFPSPSSLHSSTKTSGYSTSFAVSYLINTFDLSPKVASKLCSTYYICFETAEKPDYVLNFFRNNGFSDTQLRYMIPKAPWLLSCNLSLRVIPKFEFLLSKGASKSDIVKLISKYPMILSPSLENHIVPTYELLYRFMKSDKKTIALVINKPYLLIFHLVSHNIKTLVDTGVPDLTITRLLQLRNPFTRLFHTTEMPKLVEELKNSGFDPSKANFGLALLAWGKKLSWNEKVDAYKKWGWSDEDVLEAFRKNPCCMLTSIDKINSLMDFWVNKMGWDARAIAKAPHILPLSLEKRIIPRAPVVQFLLEKGLRKKNASLTYPFFMHEKLFRDGYLKRHKEGSYLLKLYDEKLNLAYTTDKNGMR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01763 384 PANTHER CGI-12 PROTEIN-RELATED 41 359 IPR003690 GO:0003690|GO:0006355
Trre4g01763 384 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Trre4g01763 384 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Trre4g01763 384 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Trre4g01763 384 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Trre4g01763 384 SMART mt_12 166 194 IPR003690 GO:0003690|GO:0006355
Trre4g01763 384 Pfam mTERF 250 341 IPR003690 GO:0003690|GO:0006355
Trre4g01763 384 Pfam mTERF 80 274 IPR003690 GO:0003690|GO:0006355
Trre4g01763 384 Gene3D Transcription termination factor 3, mitochondrial 179 362 IPR038538 -
Trre4g01763 384 FunFam Mitochondrial transcription termination factor-like 144 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01763 Trre-Chr4 14668394 14669548 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre4g01763 mTERF 1.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01763 K15032 - mtr:25488156 428.713