Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01761 ATGTTTAAGTTCAATTCATGGCGCCACAAAACCCTAATCTATTATCTCAAGGGATTAACATTTTCACAATCCCCAAACCCTAACCCTCTTTTCCAACATTACCCATCACTGTTTTCTCTTCATTTCTGCACCAACACTTCCGATGATTCAACCCCATTTCCTGTCTCATACCTCATCCACAACTTTGGCTTCTCCCCACAATCTGCTTCCAAACTCACCTCAACCTTCCGTCTTAATTTCAAGACTGCCCAAAAACCTGATTCAATTCTTAATTTCTTTAGAAACCATGGTTTCTCAGATTCCCAACTTCGCGATATGATACTCAAGGACCCAAGGCTACTTTCCTGCGACCCCTCCATAAGGGTGTTACCAAAGATTCAATTTTTACTCTCCAAAGGTGCTTCTAACTCTGACATTGTTAACTTTGTCAGTAAGAACCCTAGAATCTTGTCTGCAAGCTTGAAGAATTGTATAGTCCCAACCTATGAATTGGTTTATAGATTCTTGCAATCAGACAATGATACTATTGCTTGTGTAATTCAAAATCGAAATTTACTTTGTGATAATATTGTGACACATAACATCACAATGCTGGTTGAGAGTGGAGTGGCCAACTCAAACATTTCAAGAATGCTTTGGGTACATGGTCGGATATTACACTCACGTGACTTGTCGAAGTTGGTGGATGAAGTAAAGGATTTGGGGTTTAATCCTTCGAAAATAAATTTTTCCGTAGCATTGATTGCTAAAGCATCTGTAGCCAAAACCTTGTGGAAGGAGAAAGTTGATGCCTTTAAGAAGTGGGGTTGGTCTGATGAAGATGCTCTTGAAGCATTTAGAAAGAAACCTTATTGTATGCTAACATCCATTGATAAAATTAATTTAGTGATGAACTTTTGGGTCAATCAGATGGGTTGGGATGCTATGGCCATTGCCAAAACACCATTTATTTTGACGTTAAGTTTGGAAAAAAGGATCATTCCGAGGGCTGCAGTTGTGCAATTTCTTCTCAATAAAGGTTTGATAAATAAGAATGCAAGCTTAACGAATCTATTTGTAATGACCGAGAAGTTGTTTCTTGATATGCTTATAAGACGTTTTAAGAACGAGTCCTCTTATCTATTAAAGTTGTATGAGGAAAAACGAAATCATGCATAG 1158 0.3791 MFKFNSWRHKTLIYYLKGLTFSQSPNPNPLFQHYPSLFSLHFCTNTSDDSTPFPVSYLIHNFGFSPQSASKLTSTFRLNFKTAQKPDSILNFFRNHGFSDSQLRDMILKDPRLLSCDPSIRVLPKIQFLLSKGASNSDIVNFVSKNPRILSASLKNCIVPTYELVYRFLQSDNDTIACVIQNRNLLCDNIVTHNITMLVESGVANSNISRMLWVHGRILHSRDLSKLVDEVKDLGFNPSKINFSVALIAKASVAKTLWKEKVDAFKKWGWSDEDALEAFRKKPYCMLTSIDKINLVMNFWVNQMGWDAMAIAKTPFILTLSLEKRIIPRAAVVQFLLNKGLINKNASLTNLFVMTEKLFLDMLIRRFKNESSYLLKLYEEKRNHA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01761 385 Gene3D Transcription termination factor 3, mitochondrial 171 371 IPR038538 -
Trre4g01761 385 FunFam Mitochondrial transcription termination factor-like 154 371 - -
Trre4g01761 385 PANTHER CGI-12 PROTEIN-RELATED 55 366 IPR003690 GO:0003690|GO:0006355
Trre4g01761 385 SMART mt_12 209 237 IPR003690 GO:0003690|GO:0006355
Trre4g01761 385 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Trre4g01761 385 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Trre4g01761 385 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Trre4g01761 385 SMART mt_12 308 342 IPR003690 GO:0003690|GO:0006355
Trre4g01761 385 Pfam mTERF 90 237 IPR003690 GO:0003690|GO:0006355
Trre4g01761 385 Pfam mTERF 256 359 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01761 Trre-Chr4 14635356 14636513 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre4g01761 mTERF 1.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01761 K15032 - mtr:25488156 514.998