Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01755 ATGATGATGATGGCACACCAACCCTTTTCATCATTTTCTCCATTATTTCCACTTCAAATCAAATCTAAATCTTTTCAATTGTTCAATACACCATCACCTTATCTCTATCTCAAAAACAACAACTTCACTTTCCCTCTTATCATCCATCACTTTCCATCACCATGTTCTCTGCATTCTTCCACCAACACTTCTGATGATTCAACCTCTTTTGCAGTCTCCTACCTCATCAACAATTTCGAGTTCTCACCACAATCTGCTTCCAAACTTTGCTCTACCTACAATCTTAGATTTAAGACCGCCCAAAACCCTGATTCTGTTCTTGCATTCTTTAGAAACCATGGTTTCTCAGATACCCAATTACGTGATATCATTGCAAAATCACCAGACCTACTTTCCTGCAACCCCTCCAAAAGGGTGTTGCCAAAGTTTCAATTTTTTCTCTCCAAAGGTGCTTCTACCTCTTACATTGTTAAACTTGTCAGTAAGAATCCCAGAATTTTGTCTCTAAGCGTTGAGAATCATATAGCCCCAATCTATGAATTGCTTCATAGATTCTTGCAATCAGAAGAGGACACTGTTGCTATTGCAATTCACAAGCCATATTTACTTTGTTACAATCGTGTGCCAGATAACATCACAATGTTGGTTGAGAATGGAGTGAGGGACTCAACCATTGTAAGATTGCTTCGGTGGCAATCTCGTGTATTGACTTCGAGTAAATGTTACATGTTGGAGTTGGTGGAGGAATTGAAGGATTTGGGTTTTAATCCTTCAAAAATAACCTTTGGTATAGCATTGGCAGCCAAAGAATCTGTAAGCAAAACATTGTGGAAAGAGAAAGTTGATGCCTTTAAGAAGTGGGGGTGGTCTGATGAAGATGTTATAGAAGCATTTAGACGGCAGCCTCACTGTATGTTGGCATCCATTAAAAAGATTAATTTAGTGATGAGCTTTTGGGTCAATCAGATGGGTTGGGATGTGCTTGCCCTTGCAAAAGGACCGTCGGTTTTTTCAGTTAGTTTGGAAAAAAGAATCATTCCAAGGGCCCCCGTTGTGCAGTTTCTGCTGAAGAAAGGTTTGCGAAAAAAGAATGCAAGCTTAACTTATCCATTTATAGTCGGCGATAAGATGTTCCGTGACAAATTTATAAACCGTTATGAGGAGGAGTCATCTTACCTATTAAAGCTTTATGAAGAAAAATTGACTCTTGCACACACTAGGGAGGGACAAAACTGA 1236 0.3916 MMMMAHQPFSSFSPLFPLQIKSKSFQLFNTPSPYLYLKNNNFTFPLIIHHFPSPCSLHSSTNTSDDSTSFAVSYLINNFEFSPQSASKLCSTYNLRFKTAQNPDSVLAFFRNHGFSDTQLRDIIAKSPDLLSCNPSKRVLPKFQFFLSKGASTSYIVKLVSKNPRILSLSVENHIAPIYELLHRFLQSEEDTVAIAIHKPYLLCYNRVPDNITMLVENGVRDSTIVRLLRWQSRVLTSSKCYMLELVEELKDLGFNPSKITFGIALAAKESVSKTLWKEKVDAFKKWGWSDEDVIEAFRRQPHCMLASIKKINLVMSFWVNQMGWDVLALAKGPSVFSVSLEKRIIPRAPVVQFLLKKGLRKKNASLTYPFIVGDKMFRDKFINRYEEESSYLLKLYEEKLTLAHTREGQN 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01755 411 PANTHER CGI-12 PROTEIN-RELATED 67 388 IPR003690 GO:0003690|GO:0006355
Trre4g01755 411 Gene3D Transcription termination factor 3, mitochondrial 166 396 IPR038538 -
Trre4g01755 411 Pfam mTERF 273 378 IPR003690 GO:0003690|GO:0006355
Trre4g01755 411 Pfam mTERF 107 260 IPR003690 GO:0003690|GO:0006355
Trre4g01755 411 SMART mt_12 121 152 IPR003690 GO:0003690|GO:0006355
Trre4g01755 411 SMART mt_12 327 361 IPR003690 GO:0003690|GO:0006355
Trre4g01755 411 SMART mt_12 157 188 IPR003690 GO:0003690|GO:0006355
Trre4g01755 411 SMART mt_12 295 326 IPR003690 GO:0003690|GO:0006355
Trre4g01755 411 FunFam Mitochondrial transcription termination factor-like 171 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01755 Trre-Chr4 14592426 14593661 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre4g01755 mTERF 4.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01755 K15032 - mtr:25488156 473.396