Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01754 ATGTTCATGATGATTATGATACACCAATCCTTTTCATCTTCATCTTCATCTTCATATTCATCCATTTCTCCATTTTATCCACTTCAAATCAAATCTAAATCTTTTCATATGTTCAATACACCATCACCTTATTTCTTTCTCAACAACAACTTCACTTTCCCTCTTCTCTACCCATCACAATCTTCTCTGCATTTCTGCACCAACATTTCTGATGATTATTCAACCTCTTTTGAAGTATCCTACCTCATCAACAATTTCGAATTCTCCCCACAATTTGCTTCCAAACTCTGCTCAACTTACAAGGTTCGTTTCAAGACTTCTGAAAACCCTGATTATGTTCTCAACTTCTTTAGAAACAATGGTTTCTCAGATACCCAATTACGTAATATCATTTCCAAGGCACCAAAGTTACTTTCTTGTGACCCCTCCAAAAGGGTATTGCCAAAGTTTCAATTTTTACTCTCCAAAGGTGCTTCTAAATCTGACATTGTTAAACTTGTCAGTAAGAACCCTATGATTCTGTCTCCAAGCTTGGAGAATCATATAGTCCCAACCTATGAATTGCTTTATAGATTTCTGCAATCAGATAAGGACATTATTACTGGTGCAATTCATAATCCAGCTTTACTTAGTGACCATCTTGTGCCACAGAATATCACAATGTTGATTAAGAATGGACTTACAGATTCAAGCATTGCAAGATTGTTTAGGACGAGGTCTCGATCATTGAATACGAATACACGTTGTATGTTGAAGTTGGTGGAGGAATTGAAGGATTTGGGTTTTAATCCTTCAAAAATAACCTTTGGTATAGCATTGGAAGCCAAATTAACCGTAAACAAAACATTGTGGAAAGAAAAAGTTGATGCATTTAAGAAGTGGGGTTGGTCTGATGAAGATGTGATACAAGCATTTAGAAGGCAGCCTCACTGTATGTTGGTATCTGTTGATAAAATTAATTCAGTGTTGAGCTTTTGGGTCAATCAGTTGGGTTGGGATTCGCTTGCCCTTGCAATAGGACCATCGGTTTTTTCAAATAGTTTGGAAAAAAGGATCATTCCAAGGGCCTCAGTTGTGCAATTTCTGCTGAAGAAAGTCCTGCACAAACCAGCGACAAAATCGGCATGTCATGATCAAGTTTTCAGCTATACTGGAATAGGTTTGTTGGATTCAAAATGGTTTCAAGTAGCTGTGCAATTGTGGACAAATGCAGTCGTAAATATGGTAGTTGTGTACTTTTCAACACTTCAAGAGATACTAAACCTCAAAGGCCGTAACTGTGGTTGTGGACTGCAATTATTCAAAACACTTTGCAGTTAG 1320 0.3712 MFMMIMIHQSFSSSSSSSYSSISPFYPLQIKSKSFHMFNTPSPYFFLNNNFTFPLLYPSQSSLHFCTNISDDYSTSFEVSYLINNFEFSPQFASKLCSTYKVRFKTSENPDYVLNFFRNNGFSDTQLRNIISKAPKLLSCDPSKRVLPKFQFLLSKGASKSDIVKLVSKNPMILSPSLENHIVPTYELLYRFLQSDKDIITGAIHNPALLSDHLVPQNITMLIKNGLTDSSIARLFRTRSRSLNTNTRCMLKLVEELKDLGFNPSKITFGIALEAKLTVNKTLWKEKVDAFKKWGWSDEDVIQAFRRQPHCMLVSVDKINSVLSFWVNQLGWDSLALAIGPSVFSNSLEKRIIPRASVVQFLLKKVLHKPATKSACHDQVFSYTGIGLLDSKWFQVAVQLWTNAVVNMVVVYFSTLQEILNLKGRNCGCGLQLFKTLCS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01754 439 Gene3D Transcription termination factor 3, mitochondrial 179 384 IPR038538 -
Trre4g01754 439 PANTHER CGI-12 PROTEIN-RELATED 75 367 IPR003690 GO:0003690|GO:0006355
Trre4g01754 439 FunFam Mitochondrial transcription termination factor-like 178 382 - -
Trre4g01754 439 Pfam mTERF 114 266 IPR003690 GO:0003690|GO:0006355
Trre4g01754 439 Pfam mTERF 279 374 IPR003690 GO:0003690|GO:0006355
Trre4g01754 439 SMART mt_12 233 263 IPR003690 GO:0003690|GO:0006355
Trre4g01754 439 SMART mt_12 336 368 IPR003690 GO:0003690|GO:0006355
Trre4g01754 439 SMART mt_12 164 195 IPR003690 GO:0003690|GO:0006355
Trre4g01754 439 SMART mt_12 302 333 IPR003690 GO:0003690|GO:0006355
Trre4g01754 439 SMART mt_12 128 159 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01754 Trre-Chr4 14578425 14580148 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre4g01754 mTERF 2.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01754 K15032 - mtr:25488156 428.328