Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01722 ATGGCGGAACCGGCGGCGATGAACAGTAAGCAGCGAGACTTCCCTTTGGCACGTGTCAGTCAGCTCTCTTCAGCTTCTTCTGCTTCGCCGGGGATTGTCCGCCTCACTAACGACGCTCTTCAAATTCATCATGATTCTCACCAGATTGCTCTCGATGTTAATCTTCAAGATATTCAGATATTCAGATTAGGTCCTGTTAAATCGGTTTGCATGGTGGAAGGTTCCGATGCTGGCAAACAGACATCTTATTCCAGTGGAGTTGCTATACAGTTTAGAAATGAGGAAGAGAGTGAGGCCTTCCATTGTATATTCCAACAATGGAAGAAGGAATTCGATGTTCAAGGAGGGAACACGCCAAATGGAACTAATGTAATGACTTCCAAAAGCAAATTTGATGAAAAGATAGAGCCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTTCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGTACATATTATGCTGCTGTTATGGAGAATCGCACTGATTTCTTTGGTCGTGTAGTAGTTGATGTTGGCGCCGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCAGGTGCAAAACATGTATATGCAATAGAAGCATCTGAAATGGCAGAATATGCACGCAAACTTATAGCTGGGAACCCGCTACTGGGTCAACGAATTACCGTTATCAAAGGAAGAGTTGAGGATGTTGTATTGCCAGAGAAAGCAGATATTCTGATATCTGAGCCCATGGGCACCTTGTTAGTTAATGAAAGAATGTTGGAGTCTTATGTTATTGCCAGAGATAGGTTTCTTACCCCTAATGGAAAAATGTTTCCTACATCGGGAAGGATTCACATGGCACCTTTCAGTGATGAATATTTGTTTGTTGAAATTGCTAGCAAGGGGCTGTTCTGGCAGCAGCAAAACTATTATGGTGTTGATTTGACGCCCTTGCACGGGACTGCCTATCAAGGATACTTCTCTCAGCCTGTTGTGGATGCTTTTGATCCAAGGTTGTTAATATCTCCTTCTATGTTCCATGCAATGGACTTTACCAAAATAAAGGAAGAAGAGCTGTATGAAATCGACATTCCTCTCAGATTTATAGCCAGTGTGGGTGCTAGAGTACATGGTTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTTCTGTACAAAGGTGGCTTACCACTGCCCCTGGTTCACCGGTAACTCATTGGTATCAGTTACGCTGTGTTCTCTCCCAGCCTATTTATGTCATGGCAGGGCAAGAAATTACTGGCAAGCTTCACTTGATTGCCCATAGTGCACAGAGTTACACAATCTATTTAACCTTGTCAGCTAAAATGTGGGGGCCTGGCGCTGAGCAAGGAGGGATTCTTCAAACATCATCCTGTAAACTTGATCTGAAAGAACCATACTATAGAATGTCTCAACCGCAAGCTTATCCATCAACCCAAGATCATCAACCTCAACCATTTTTATCGACACAGGATGTAAAGAACCAATCTCAGGATTTGGATGACACCGAGATAATGCAACAGTCTTGA 1563 0.4267 MAEPAAMNSKQRDFPLARVSQLSSASSASPGIVRLTNDALQIHHDSHQIALDVNLQDIQIFRLGPVKSVCMVEGSDAGKQTSYSSGVAIQFRNEEESEAFHCIFQQWKKEFDVQGGNTPNGTNVMTSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVMENRTDFFGRVVVDVGAGSGILSLFAAQAGAKHVYAIEASEMAEYARKLIAGNPLLGQRITVIKGRVEDVVLPEKADILISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPTSGRIHMAPFSDEYLFVEIASKGLFWQQQNYYGVDLTPLHGTAYQGYFSQPVVDAFDPRLLISPSMFHAMDFTKIKEEELYEIDIPLRFIASVGARVHGLACWFDVLFNGSSVQRWLTTAPGSPVTHWYQLRCVLSQPIYVMAGQEITGKLHLIAHSAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPSTQDHQPQPFLSTQDVKNQSQDLDDTEIMQQS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01722 520 MobiDBLite consensus disorder prediction 484 520 - -
Trre4g01722 520 Gene3D Vaccinia Virus protein VP39 122 283 IPR029063 -
Trre4g01722 520 FunFam Probable histone-arginine methyltransferase CARM1 123 283 - -
Trre4g01722 520 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 99 466 IPR025799 GO:0016274|GO:0018216
Trre4g01722 520 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 457 IPR029063 -
Trre4g01722 520 Gene3D - 285 494 - -
Trre4g01722 520 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 136 451 IPR025799 GO:0016274|GO:0018216
Trre4g01722 520 Pfam Ribosomal protein L11 methyltransferase (PrmA) 179 252 - -
Trre4g01722 520 CDD AdoMet_MTases 182 282 - -
Trre4g01722 520 FunFam Probable histone-arginine methyltransferase CARM1 285 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01722 Trre-Chr4 14292673 14298751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01722 143 433 C2H2 Transcription Factor Family AT3G12270 33.010 1.15e-39 150