Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01629 ATGGGAGTTGAAAAAGAAGGGACTAAAAATGGAGGTAGTTTTTTCCATTTGTTTGATTGGACCTCGAAATCGCGTAAGAAATTATTTGCATCTAAATCAGATTTACCAGAATCGTTGAAACATGAAAGAAAAGCCAACCACAATGTGGCAATGAGACATCCCTATCTGGTCGATGAAGACGAAAACGGTGTAGGGGAATATGTTAGAGGAAGTTGTGATCATAGTTATGCTTCATCTGTTACAAGCGACGATACATGTGGAACAAGAGCTCCTAATGTAGTTGCAAGGCTTATGGGATTAGATTCTTTGCCTTCTTCTGGTTTCTCTGATCCTTACTCGACGCCGTATTTTGATACGAGATCGCTTCAAGATTCTCAGTTTCTATATTCTGGAAAGTTGGTTGAAAACGTTGAGGGAACTTCTAGCAACTTCGTCGAGCCAAAGCCTCAAAAGGCTATTACAAGGCCAATTGAAAAGTTTCAAAGAGAAGTGTTGCCTCCGAAATCGGCTAAATCAATTCCTGTTACACACCATAAACTTTTGTCTCCTATTAAGAATCCTGGCTTTGTTCCATCCAACAATGCTGCTTATATAATGGAGGCTGCAGCGAGAATTATTGAACCTGGATCCTCCCAAGCAAAGGCTAAAACACATATGGCGGCATCATCGATAGTCTCGCTGAGGGTAAAAGATGTTAGAGATAAGTTGGATTCTTCGCAAAAGGCGCCTCTAATTGCGACATCTTCCGTAGCTTTTAGGACTCGAGAGTTAAAAGAAAAAAGAGATATTTCTCAAAGAACAAGCAGGGTTTCGGAACGTTCTCAAAGGTCATCGGTCGAGTCGAATGCTGCAAAGTATTTAAAGGGACAATCTTTGAATAGAAGTTGGAATGGAACCGCGGAAACATCTGTGAAGTCTCCTACGCATGCAGAAGAAGACTCTTCTTTGAAGAATAAAGGGAAGTCTGTTTCGCTTGCGGAAACATCTGTGAAGTCTCCTACACATGCAGAAGAAGATTTTACTTTGAAGAATAAAGGGAAGTCTGTCTCGCTTGCAATCCAAGCAAAGGTGAATGTTCAAAGAAGGGAAGGTTTGAGTTCGACCGGTGGCAGAAACTTGATGGGACAAAAAGAGCATCTCGACAGTAAATCCAATCAGCCACTACCTAAGGCAAATGCTCAGAAAAATTTGCATAGGAAATCTTCTAGCCAGAATTCTTCTAATGTTCTGAGGCAGAATAATCTGAAACAGAACCATTCAATTGATAATAACGACAAATTAGTACCATCTAAGCCATTGGTTTCCAGTTCACAAGGTAGAAAAGCTACGACTGGAGATTCCCCTTATGGACGACACAGAAGTTCTAGTAGTAAATCCACTGCAAAATCTAAAGTCGGATCGAGAAAGTCAGCCGTGGAGGTGACAGATAGTGAAAACGAAATTCTATACACCAGCACAAACAGTTTTCCTAGAAAGAAAAGGACCACTGACAAGGACTGGAACGATAGAGTTGTCGATAATTTGTTCATTGACAAAACTCCAAAGTCTGTTAAGTTGAATCTATCAAGTAATAAACAATACGGTTGGTCTGAAGAAGTGAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTCACTACACCATTAACAAGGAGCAACAATCCAGGTTCTGAGACACCTCGACAAGATGGAAAGAATACTAACGATCTTTCATTGGATCAACGCATCAAAAGAGTGTTGCTCGATGCAGACAATACAAGGTCTCCAATAGGATACAATGTAATTGGTGGTGATGCCTTAGGTATTCTTTTAGAACAGAAGTTGAGGGAATTGAGTCAATTGACAAGTGGAGTTGAAACCTCTTCCGTTATGGCACCAAAGTCAAATGATCAAGTAACCAACTTCAATATAGTTAACCTCAATCCAAGATTGGAGCAGAAGAAAGACCAAGATATGTCATTTACAGAAAGTTTAAGTGGTAGCCGTTGTTCTGACATGTCCTTCACCAATCTTCCAGAATCATCCTTGAAACATAAATCATGGGGTGATGAGATGGAACCATTGTCATTCAATTGCCGACAACCAAGTCCAATCTCAGTTCTTGAGCCATCTTTTTCGATCGAAAGCTGTGAATCTTCGATGAGCACTGATGTTACTAGTACAGAAGGAAGCAAAATGTTTTCGTCTCTTCAAGCTCAAGAAATCCATGGCTTTAATTTTTCACGGAAGTTCTATCCTACGGAATGTGATGCAGAGTTATCTGACTCGGCTTCTTCAACATCAACTAGGACTATGATGAAGAAGCAGAATAGTACATTTTCTGCGATGAAGTTTGGTAGATCATCAAGTACATGGGAGCTAGACTATGTGAAAGAGATACTATGTAATGCTGAGTTGATGTATATGGATTTTTCACTCGGCCGAACTCGCGAGGTTGTTAACTCTCATCTGTTCAACCAGTTGGAAAGCCGAAAAGGAGGTTTCAAGATCGACGATGAATCAAGGATAGAAAGGAAAGTTATATTTGATTGTGTGAGTGAATGTTTGGATTTGAGATGCAGAAGTTATGTAGGAGGAGGGTACAAAATGTGGATTAAAGGGTTTGATATGGTGAGAAGAAAAGATTGGTTGGCAAAAGATGTGTACAAGGAAATTTTGGGTTGGAAAGGGATGAGAGATTCAATGGTTGATGAACTTGTGGACAAGGATATGAGTAGCCAATTTGGAAAGTGGTTGGATTTGGATTATGAGATTGATGCTTATGATTTTGGAGAAGAAGTTGCTGATCAAATATTTAATTCTTTGGTTGATGATGTTGTCTATGAAATGTTGCAATTTTAA 2841 0.3963 MGVEKEGTKNGGSFFHLFDWTSKSRKKLFASKSDLPESLKHERKANHNVAMRHPYLVDEDENGVGEYVRGSCDHSYASSVTSDDTCGTRAPNVVARLMGLDSLPSSGFSDPYSTPYFDTRSLQDSQFLYSGKLVENVEGTSSNFVEPKPQKAITRPIEKFQREVLPPKSAKSIPVTHHKLLSPIKNPGFVPSNNAAYIMEAAARIIEPGSSQAKAKTHMAASSIVSLRVKDVRDKLDSSQKAPLIATSSVAFRTRELKEKRDISQRTSRVSERSQRSSVESNAAKYLKGQSLNRSWNGTAETSVKSPTHAEEDSSLKNKGKSVSLAETSVKSPTHAEEDFTLKNKGKSVSLAIQAKVNVQRREGLSSTGGRNLMGQKEHLDSKSNQPLPKANAQKNLHRKSSSQNSSNVLRQNNLKQNHSIDNNDKLVPSKPLVSSSQGRKATTGDSPYGRHRSSSSKSTAKSKVGSRKSAVEVTDSENEILYTSTNSFPRKKRTTDKDWNDRVVDNLFIDKTPKSVKLNLSSNKQYGWSEEVKKKDMDVVSFTFTTPLTRSNNPGSETPRQDGKNTNDLSLDQRIKRVLLDADNTRSPIGYNVIGGDALGILLEQKLRELSQLTSGVETSSVMAPKSNDQVTNFNIVNLNPRLEQKKDQDMSFTESLSGSRCSDMSFTNLPESSLKHKSWGDEMEPLSFNCRQPSPISVLEPSFSIESCESSMSTDVTSTEGSKMFSSLQAQEIHGFNFSRKFYPTECDAELSDSASSTSTRTMMKKQNSTFSAMKFGRSSSTWELDYVKEILCNAELMYMDFSLGRTREVVNSHLFNQLESRKGGFKIDDESRIERKVIFDCVSECLDLRCRSYVGGGYKMWIKGFDMVRRKDWLAKDVYKEILGWKGMRDSMVDELVDKDMSSQFGKWLDLDYEIDAYDFGEEVADQIFNSLVDDVVYEMLQF 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01629 946 Pfam Domain of unknown function (DUF4378) 786 938 IPR025486 -
Trre4g01629 946 MobiDBLite consensus disorder prediction 546 567 - -
Trre4g01629 946 MobiDBLite consensus disorder prediction 270 305 - -
Trre4g01629 946 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 941 - -
Trre4g01629 946 MobiDBLite consensus disorder prediction 361 468 - -
Trre4g01629 946 Pfam DUF761-associated sequence motif 78 109 IPR032795 -
Trre4g01629 946 MobiDBLite consensus disorder prediction 546 570 - -
Trre4g01629 946 MobiDBLite consensus disorder prediction 361 475 - -
Trre4g01629 946 MobiDBLite consensus disorder prediction 259 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01629 Trre-Chr4 13340663 13344179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01629 12 944 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 31.256 4.04e-94 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01629 - - tpra:123885644 1746.87