Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01585 ATGAAATTCATCAAGAATAATATTAACCTCAAATTCTTTTACATAATCCTAATAAGTTTTGCATTAGAAAAATGCATGGCTCACACATTCTTGGACTCACCAAGCGTCGTTGAAACAAGAACTCGTAGTCATTCGGCGAATCCACCAACACAATCTTCAGAATCGCCTTCAGAATCACCTTCTGAAGCGCCTTCTGAAGCGCCTACTGAGTCAAACTCTGATTTTCCCGAAATTCCAAACTTTGCATTAGGATCAGAATCAGGACAAGACACTGGTGATTCAGCTTCATTCAAAGATGCAATCTCCGACATTCTCAAAGGATCGTTGTTCGGAAACTCCATATCAATGCCTACGCAACCTCACCACATATCCGAAGCAAAACAAAGCACCCTCGGACTAGACCAAATATGTATGCATACAGATTACCCCGACGTTTGTATGACAACAATTAAACCTCTAGTAAGTCAAAATTTCGAGATAATTGATGTCCTCGCTGCTGCCATAAAAGTTTGTTCGATTGAAGTAAAGTTGACAATAACCAAAGTGGCTAGACATGCCGCGAATAATCCGGATGTTGCTAACGCAGTTTCTGAATGTCAAGAACAATACAAAATTGCTTCGGAAAATCTTCAAAGAGCAATGAAAGCTATTCAGTCGCGCGATCTTGGTACCATTACCGTTATGCTTAGTGCTGTTATGGCCGATGTTTCAACATGCGAGAGCGCTTTTGAGGATCTAAGAAAATCGCCTTCTTCCGACATGACTAAAACTGATGGTTTAGTTACTATTACTGTTAGCAATTGTCTCTCCATTGCTAATTTGATTCCCTATTAA 834 0.3993 MKFIKNNINLKFFYIILISFALEKCMAHTFLDSPSVVETRTRSHSANPPTQSSESPSESPSEAPSEAPTESNSDFPEIPNFALGSESGQDTGDSASFKDAISDILKGSLFGNSISMPTQPHHISEAKQSTLGLDQICMHTDYPDVCMTTIKPLVSQNFEIIDVLAAAIKVCSIEVKLTITKVARHAANNPDVANAVSECQEQYKIASENLQRAMKAIQSRDLGTITVMLSAVMADVSTCESAFEDLRKSPSSDMTKTDGLVTITVSNCLSIANLIPY 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01585 277 Pfam Plant invertase/pectin methylesterase inhibitor 134 271 IPR006501 GO:0004857
Trre4g01585 277 Coils Coil 196 216 - -
Trre4g01585 277 Gene3D Invertase/pectin methylesterase inhibitor family protein 132 275 IPR035513 -
Trre4g01585 277 MobiDBLite consensus disorder prediction 40 94 - -
Trre4g01585 277 NCBIfam pectinesterase inhibitor domain 110 273 IPR006501 GO:0004857
Trre4g01585 277 SMART PMEI_2 128 271 IPR006501 GO:0004857
Trre4g01585 277 PANTHER PECTINESTERASE INHIBITOR-LIKE 117 275 - -
Trre4g01585 277 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 134 275 IPR035513 -
Trre4g01585 277 CDD PMEI-like_2 133 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01585 Trre-Chr4 12906641 12907474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01585 125 274 Carbohydrate Esterase AT5G49180 25.581 2.27e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01585 - - psat:127074109 286.574