Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01583 ATGGCGTTTTGGTGGTCCTTACTCGTTCTAGCATTCGCTTTCGCCATTTGCAAGTTTCTTCTCATTCTCATTCCTCCTAAAGTTCCTTCAATCGATGTTGATGCTTCCGATGTGTTGGAATATGGAAACCAATCGCAGGAGAATAGATTCATATATGTGCCTCCGAGGGGTGCGGCACAACAATCAGGCAAGAAAGTTCAGTGCTATGAGCCTGCCACTATGAAATATTTGGGATATGTTCCTGCTTTGACACCAGATGAGGTCAAGGAGCAAATTGAAAAGGTACGGAAGGCACAAAAAATGTGGTCAAAGACCAGCTTCAAGCAAAGGCGCCAGTTTTTGCGTATACTATTGAAGTATATAATTAAACATCAAGCACTTATCTGCGAGATATCTTCACGTGATACTGGAAAAACAATGGTAGATGCCTCTCTAGGAGAAATAATGACAACATGTGAGAAGATCAACTGGCTGCTGTCAGAGGGTGAACAAAGTCTGAAACCTGAGTACAGATCGTCTGGAAGATCAATGCTTCATAAGAGATCCAGAGTAGAATTTCACCCCCTTGGTGTTATTGGAGCCATTGTGTCGTGGAACTATCCCTTCCATAATATTTTTAACCCTATGCTAGCAGCAGTTTTTTCTGGAAATGGTATTGTGATTAAGATATCAGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGGATCATCCAATCAGCCCTTGCTGCTATAGGAGCTCCAGAGGACCTTGTTGAGGTGATAACAGGGTTTGCTGAAACAGGAGAAGCACTGGTGTCTTCTGTTGATAAAGTCATTTTTGTTGGATCACCTGGGGTTGGGAAGATGATAATGAAAAATGCTGCTGAGACACTTATACCAGTTACACTAGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGACGATGCAGATGTGGACCATGTTGCTCAAATTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGGCAGAACTGTGCTGGAGCTGAACGATTGTATGTCCATAGGAACATTTATCCAGCTTTTGTCAGCAAAGTTACCAAAATCATCAAATCTGTTACAGCTGGCCCACCACTTGCTGGGAAGTATGATATGGGAGCTTTATGCATGCATGAGCACTCTGAAAAGCTTGAAGCTCTTCTAAATGATGCTTTAGACAAAGGAGCTGAAATTGTTGCTCGTGGAAGTTTTGGACATATAGGTGAAGATGCTGTTGATCAGTATTTTCCCCCTACTGTGATTGTCAATGTGAATCACTCGATGAGATTGATGCAAGAAGAGGCATTTGGACCTATCATGCCAATAATGAAGTTTAGCTCTGATGAGGAGGTTATCAAGCTTGCTAATGACTCAAAATATGGGCTCGGCTGTGCTGTTTTCTCAGGCAGTCAAAGTCATGCCAGAGAGCTAGCTTCTCATATACATTGTGGGGTAGCTGCAATTAATGATTTTGCATCAACATACATGTGTCAGTCCCTGCCATTTGGGGGAGTGAAACACAGTGGATTTGGACGATTCGGTGGCGTTGAAGGCTTGCGAGCATGCTGCCTTGTAAAAGCAGTTGTTGAAGATAGGTGGTGGCCATTCATTAAGACCAAGATACCAAAGCCTATTCAGTATCCTGTGGCAGAAAATGGATTTGAATTTCAGGAGTCACTTGTTGAAGCACTTTATGGGCTTAGCATATGGGATCGTTTGCAAGCATTGGTAAACGTTTTGAAAATGCTTACCGAGCAGAACTCTACCGGTGGCAATAAGAAGGAGAAATGA 1788 0.4279 MAFWWSLLVLAFAFAICKFLLILIPPKVPSIDVDASDVLEYGNQSQENRFIYVPPRGAAQQSGKKVQCYEPATMKYLGYVPALTPDEVKEQIEKVRKAQKMWSKTSFKQRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQSLKPEYRSSGRSMLHKRSRVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMKNAAETLIPVTLELGGKDAFIVCDDADVDHVAQIAVRAVLQSSGQNCAGAERLYVHRNIYPAFVSKVTKIIKSVTAGPPLAGKYDMGALCMHEHSEKLEALLNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVIKLANDSKYGLGCAVFSGSQSHARELASHIHCGVAAINDFASTYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKAVVEDRWWPFIKTKIPKPIQYPVAENGFEFQESLVEALYGLSIWDRLQALVNVLKMLTEQNSTGGNKKEK 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01583 595 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Trre4g01583 595 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Trre4g01583 595 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Trre4g01583 595 CDD ALDH_F15-22 69 531 - -
Trre4g01583 595 FunFam aldehyde dehydrogenase 22A1 65 322 - -
Trre4g01583 595 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Trre4g01583 595 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
Trre4g01583 595 FunFam Aldehyde dehydrogenase A 301 495 - -
Trre4g01583 595 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 59 527 - -
Trre4g01583 595 SUPERFAMILY ALDH-like 60 529 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01583 Trre-Chr4 12889667 12896237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01583 1 588 Aldehyde Dehydrogenase Gene Family AT3G66658 80.442 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01583 - - gmx:100797873 1110.9