Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01570 ATGCTTCAGCCATTGATGAATCTTCTCTCTCCATGTTGGAAGCCGTTCGGGCACGGTGACGATTCTTCATCAGGCATTGTTGGAAGAGAAGGAAAAGACGGATTACTTTGGTTTCGTGATATTGGAAAATATGGCTCCGGTGAATTTTCCATGGCCGTTGTTCAGGCTAATCAAATCCTTGAAGATCAGAGCCAGATCGAATCTGGTCCACTTGGAACGTTCGTTGGTGTTTACGATGGTCATGGTGGACCTGATGCTGCTCGTTACGTTTGCGATCATTTGTTCCGTAATTTCCAAGCCGTATCGAGTGAGTCACGGGGTGTTGTGACGGATGAGACAATTCAATCGGCGTTTCGTTTAACAGAAGAAGGTTTTACTGCCAGGGTTTCTGAGTTTTGGAATACTCGACCTCAAGTAGCAACTACTGGAACATGTTGTTTGGTTGGAGTGATTTATCAGCAAACGCTTTTTGTGGCGAATTTAGGAGATTCCCGTGTTGTTTTAGGAAAGAAAGTTGGGAATACTGGTGGGGTTGCGGCGATTCAGCTGTCTACGGAACATAATGCGAATCTTGAGGCTGTTAGACATGAGCTTAAAGAATTGCACCCTCATGATCCCCAGATTGTTGTCCTGAAACATGGAGTGTGGAGAGTAAAAGGCATTATACAGGTTTCTAGATCCATAGGTGACGTATATATGAAACATGCACAGTTTAACCGGGAACCAATTAATCCGAAGTTCAGACTTCCTGAACCAATGCACATGCCTATCTTGTCTGCTAATCCATCTATTCTTTCTCATCCTCTCCATCCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAATAATGATCAAGCAGTCGAGATTGTTCACAGAAGTCCACGCGCTGGTAGTGCCAAGAGACTTATCAAGGCGGCCCTGCAGGAAGCAGCTAGAAAACGAGAAATGCGATATTCAGACCTTCGTTCAATTGACAAGAAAGTGCGACGGCATTTTCATGACGATATAACTGTTATTGTTTTATTCTTAAATCACGACCTTATAACTAGAGGCACAGTTCAAAACCCGCCACTGTCAATTCGAAGTGCTCTCAATCACTGA 1119 0.4379 MLQPLMNLLSPCWKPFGHGDDSSSGIVGREGKDGLLWFRDIGKYGSGEFSMAVVQANQILEDQSQIESGPLGTFVGVYDGHGGPDAARYVCDHLFRNFQAVSSESRGVVTDETIQSAFRLTEEGFTARVSEFWNTRPQVATTGTCCLVGVIYQQTLFVANLGDSRVVLGKKVGNTGGVAAIQLSTEHNANLEAVRHELKELHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINPKFRLPEPMHMPILSANPSILSHPLHPNDSFLIFASDGLWEHLNNDQAVEIVHRSPRAGSAKRLIKAALQEAARKREMRYSDLRSIDKKVRRHFHDDITVIVLFLNHDLITRGTVQNPPLSIRSALNH 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01570 372 SMART PP2C_4 35 347 IPR001932 -
Trre4g01570 372 CDD PP2Cc 49 349 IPR001932 -
Trre4g01570 372 PANTHER PROTEIN PHOSPHATASE 46 347 IPR015655 GO:0004722|GO:0006470
Trre4g01570 372 FunFam Probable protein phosphatase 2C 42 39 357 - -
Trre4g01570 372 ProSitePatterns PPM-type phosphatase domain signature. 74 82 IPR000222 GO:0043169
Trre4g01570 372 SUPERFAMILY PP2C-like 57 350 IPR036457 -
Trre4g01570 372 Pfam Protein phosphatase 2C 71 318 IPR001932 -
Trre4g01570 372 ProSiteProfiles PPM-type phosphatase domain profile. 45 349 IPR001932 -
Trre4g01570 372 Gene3D - 40 358 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01570 Trre-Chr4 12773939 12780386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01570 1 302 PP2C-type Phosphatase Gene Family AT3G17090 69.551 1.06e-157 444