Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01568 ATGGCAACATCTATGATCTCAAACACAACAACACCACCACCAACAACAAGTGACCGATCACATAGAATAAAAAAGAAGAAAAAAGCCCAATCAAAAGCCCAACAGGCCCAAGAACAACAACAAAGGTTACAAAGCCATGCTAAATGGAGATCACAAGCCCAACAACAAATCTACTCTTCCAAACTCCACCAGGCTTTATCAAGAGTCAACCTTTCCGGTGGGCCTCGCCGTGGTAAAGCCGTCCGTGAAGCCGCCGATAGAGTCCTCGCCACCGCCGCCAAAGGAAGAACACGGTGGAGCAGAGCCATACTCACAAACAAGCTCAGACTCAAATTCAGGAAACAAAAGCGAAATCATAATCAACAAAAAGCTATTGGGCCGGCCCGGTCTAAAAAAGCCCGGTTCGGTGTTTTACGTCTTAAAGGAAAAACACTTCCAGCGGTTCAGAGAAAAGTTAAAGTTTTGGGCCGGTTAGTTCCCGGTTGTAGAAAAGAACCGTTACCGGTTATTCTTGAAGAAGCTATTGATTATATACCGGCTCTTGAGATGCAAGTTCGTGCCATGGCAGCTTTAGCTGATTTACTATTCGGCTCTTCATCTTCCGCCGCCGCCGCTGGCTCTGCTGATAGCTCCGGTTTGCCGCCGCCGAGTTAA 654 0.474 MATSMISNTTTPPPTTSDRSHRIKKKKKAQSKAQQAQEQQQRLQSHAKWRSQAQQQIYSSKLHQALSRVNLSGGPRRGKAVREAADRVLATAAKGRTRWSRAILTNKLRLKFRKQKRNHNQQKAIGPARSKKARFGVLRLKGKTLPAVQRKVKVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMAALADLLFGSSSSAAAAGSADSSGLPPPS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01568 217 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 50 198 IPR044660 GO:0006355
Trre4g01568 217 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 196 IPR036638 GO:0046983
Trre4g01568 217 MobiDBLite consensus disorder prediction 1 17 - -
Trre4g01568 217 MobiDBLite consensus disorder prediction 1 55 - -
Trre4g01568 217 MobiDBLite consensus disorder prediction 33 55 - -
Trre4g01568 217 Coils Coil 26 46 - -
Trre4g01568 217 CDD bHLH_AtIBH1_like 137 192 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01568 Trre-Chr4 12763491 12764144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01568 4 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 49.302 2.23e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01568 - - gmx:100792237 239.965