Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01513 ATGGCCATAGAAACTGATGCTGCCACCACTCCACACTTGGCGCTCTCTGATACAGACATCAACTGGGACAGGTTGGATAAGACTAGATTCCACATTATTGGTGCAATACTCTTCACAGCTCAATCAGCATTACTTCATCCAACAGCAGTGGTGAAGACAAGAATGCAAGTAGCTAGTTCAGGACTCTCCAACATGAAGGGAACCTCGGTGTTCACTCATATTTTGAGGAGTGATGGAATTCCTGGAATTTTTAGAGGTTTTGGAACTTCTGCTATTGGATCAATGCCTGGTAGGGTTTTAGCTCTCACATCTCTTGAGATGTCAAAGGATTTTATGTTGAAACACACTCAAGGTAGTGATATCCCCGAAGCATCGCGGATTGGCCTTGCAAATGGTGTTGCTGGCATGGTTTCAAATTTGGTATCTTGTGTTTACTTTGTGCCTTTGGATGTGATCTGTCAAAGGTTAATGGTTCAAGGTCTTCCTGGAACTACATGTTGCAGAGGACCATTTGATGTTATCCGTCGAGTAGTTCAGGCCGAGGGTTTTCGTGGATTGTATAGAGGTTTTGGATTAACGGCTGTAACACAATCTCCAGCATCTGCTCTTTGGTGGGGATCCTATGGTGCAGCACAACACATAATTTGGAGGAGTTTAGGCTACAAAGACGACACGGAGAAGAAGCCTTCACACGTGGAAATGGTGACAGTTCAGGCTACTGCCGGGATGGTGGCTGGTGCTTGTTCCTCTGTCATCACTACTCCCATAGATACTGTAAAAACACGGCTTCAGGTTATGGACAACTATGGTTCTGGACGACCATCGGTACTAAAGACAGCAAAAACTCTCCTTAAGGAAGATGGATGGTGGGGATTTTACAGAGGGTTTGGACCAAGATTTTTGAACATGTCACTTTATGGAACAACTATGATTGTTACCTATGAACTAATAAAGAGATTATCAGTACAACCAAGTCTAAAGTCTTTTGCTTAA 993 0.4361 MAIETDAATTPHLALSDTDINWDRLDKTRFHIIGAILFTAQSALLHPTAVVKTRMQVASSGLSNMKGTSVFTHILRSDGIPGIFRGFGTSAIGSMPGRVLALTSLEMSKDFMLKHTQGSDIPEASRIGLANGVAGMVSNLVSCVYFVPLDVICQRLMVQGLPGTTCCRGPFDVIRRVVQAEGFRGLYRGFGLTAVTQSPASALWWGSYGAAQHIIWRSLGYKDDTEKKPSHVEMVTVQATAGMVAGACSSVITTPIDTVKTRLQVMDNYGSGRPSVLKTAKTLLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSVQPSLKSFA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01513 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 320 IPR018108 -
Trre4g01513 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 214 IPR018108 -
Trre4g01513 330 SUPERFAMILY Mitochondrial carrier 23 316 IPR023395 -
Trre4g01513 330 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Trre4g01513 330 Pfam Mitochondrial carrier protein 237 321 IPR018108 -
Trre4g01513 330 Pfam Mitochondrial carrier protein 32 115 IPR018108 -
Trre4g01513 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 111 IPR018108 -
Trre4g01513 330 Gene3D Mitochondrial carrier domain 122 325 IPR023395 -
Trre4g01513 330 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 11 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01513 Trre-Chr4 12067068 12070284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01513 17 320 Chloroplast and Mitochondria Gene Families AT5G15640 50.654 5.33e-107 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01513 K15121 - gmx:112997745 580.482