Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01510 ATGGTTCCTTACCATCTTTTGAGGGATACAAGTTGTTTCATTGGATTCTGTCAAGATGCTTACACACATGGTTTATATTGTGGTGTAATCGACGCATTGGAGATTTCTTTTGAGACAAGTGAACAAAGATTGATTGGTGATGCTGCTAAGAATCAAGCTGCTTCCAACCCTCAAAACACTGTCTTTGATGCTAAGAGGTTTCTACTTCCATTCATCTCCGCCATTGCCGTCTCCTCCGCTCAAAACGCATTCATCTTCGCCGCTCAAAATGCATTTATCTCCGCCGTTCAAAATGCGTTCATCTCTTCCGCTCAAATTTGA 321 0.4206 MVPYHLLRDTSCFIGFCQDAYTHGLYCGVIDALEISFETSEQRLIGDAAKNQAASNPQNTVFDAKRFLLPFISAIAVSSAQNAFIFAAQNAFISAVQNAFISSAQI 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01510 106 SUPERFAMILY Actin-like ATPase domain 35 69 IPR043129 -
Trre4g01510 106 Pfam Hsp70 protein 35 68 IPR013126 GO:0005524|GO:0140662
Trre4g01510 106 Gene3D - 35 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01510 Trre-Chr4 11996886 12003265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01510 39 68 Calmodulin-binding Proteins AT1G16030 76.667 7.48e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01510 - - lja:Lj0g3v0211109.1 55.0694