Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01490 ATGATTTTGGAGATGGGTTCCATGTGGGTGATCCTTATGGTCATTGGTGGTTCTCTTTTGGTCATAAGATCCATTCTCAAAAATGTAAATTGGTGGCTTTATGAATCCAAATTAGGTGTGAAGCAATACTCTTTGCCACCAGGTGATATGGGATGGCCCTTCATTGGTAACATGTGGTCCTTCCTTAGAGCTTTCAAGTCTAAGGACCCTGACTCCTTCATCTCCTCTTTTGTCTCCAGATATGGAAATAGTGGAATATACAAAGCCTTAATGTTTGGAAACCCAAGTGTAATTGTGACAACATCTGAAGCATGCAAAAGAGTTCTAACAGATGATGAAAAATTTACAACCGGTTGGCCTCAATCTACAATCAAACTCATCGGAAAGAACTCATTCATTGCAATGGTTTACGAAGAACATAAGCGGCTTCGACGTTTAACTTCATCTTCGATCAATGGCATGGAAGCATTGTCTTTGTACTTGACATATATCGAAGAAAATGTTATAAGTTCGTTAGAGAAATGGTCCAACATGGGACAAATTGAGTTCTTAACCGAAATTCGGAAGCTTACTTTTAAAATCATTATGCATATTTTCCTTAGTTCAGAAAGTGAACCTGTTATGGAGGCTTTGGAAAAAGAATACACAATACTTAATCATGGAGTTAGAGCTATGCAAATAAATGTTCCTGGATTTGCATACTATAAAGCACTCAAGGCTAGGAAAAATCTAGTTGCCATATTTCAATCTATTGTGGATGAAAGAAGAAACATAAGAAAGATATATTCAACAAACAAAGCAAAAGATATGATGGATTCTCTTATAGATGTTGAAGATGATAATGGTAGAAAGTTGAGTGATGAAGCTATAATTGATATAATGTTAATGTACTTGAATGCTGGTCATGAGTCTTCAGGACATATTACAATGTGGGCTACCTATTTCCTACAAAAACATCCAGAATATCTTCAAAAGGCCAAGGAAGAACAAGAAGAAATAATAAAGAGGAGGCCTCCAACACAAAAAGGGTTGACACTTAAGGAAATTCGCAGCATGGATTTTCTTTATAAGGTGATTGATGAAACAATGCGTGTAATAACATTCTCATTGGTGGTCTTTCGAGAGGCGAAATCTGATGTCATGATTAATGGTTATATCATTCCAAAAGGTTGGAAAGTTCTTACATGGTTCAGATCAGTTCATCTTGATCCTGAAATATATCCTAATCCAAAGGAATTTAATCCTAATAGATGGAATAAAGAATACAAAGCAGGGGAATTCCTTCCCTTTGGAATAGGAACTAGATTGTGTCCTGGCAATGATCTTGCCAAAATGGAAATAGCAGTTTTTCTTCATCATTTTATTCTAAATTACAAGCTTGAACAACATAATCCTAAATGTCCTGTTAGATACTTACCACATACAAGACCTATGGACAATTGCTTAGGAAGGGTCAAGAAATGTTGA 1467 0.3592 MILEMGSMWVILMVIGGSLLVIRSILKNVNWWLYESKLGVKQYSLPPGDMGWPFIGNMWSFLRAFKSKDPDSFISSFVSRYGNSGIYKALMFGNPSVIVTTSEACKRVLTDDEKFTTGWPQSTIKLIGKNSFIAMVYEEHKRLRRLTSSSINGMEALSLYLTYIEENVISSLEKWSNMGQIEFLTEIRKLTFKIIMHIFLSSESEPVMEALEKEYTILNHGVRAMQINVPGFAYYKALKARKNLVAIFQSIVDERRNIRKIYSTNKAKDMMDSLIDVEDDNGRKLSDEAIIDIMLMYLNAGHESSGHITMWATYFLQKHPEYLQKAKEEQEEIIKRRPPTQKGLTLKEIRSMDFLYKVIDETMRVITFSLVVFREAKSDVMINGYIIPKGWKVLTWFRSVHLDPEIYPNPKEFNPNRWNKEYKAGEFLPFGIGTRLCPGNDLAKMEIAVFLHHFILNYKLEQHNPKCPVRYLPHTRPMDNCLGRVKKC 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01490 488 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01490 488 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01490 488 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01490 488 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01490 488 FunFam Ent-kaurenoic acid oxidase 36 488 - -
Trre4g01490 488 Pfam Cytochrome P450 46 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01490 488 SUPERFAMILY Cytochrome P450 41 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01490 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Trre4g01490 488 PANTHER CYTOCHROME P450 26 42 473 - -
Trre4g01490 488 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01490 488 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01490 488 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01490 488 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01490 488 CDD CYP90-like 78 487 - -
Trre4g01490 488 Gene3D Cytochrome P450 35 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01490 Trre-Chr4 11744421 11752793 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01490 8 488 Cytochrome P450 AT2G32440 67.012 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01490 K04123 - gmx:100781238 883.634