Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01489 ATGGGGTCCATATGGATTATTTTTATTGCTATTGTTGGTGCTCTTTTGGTCCTAAGAGCCCTTCTCAAGAATGTGAATTGGTTGCTCTATGAAGCAAAACTTGGTGTTAAGCAATACTCTTTGCCACCAGGTGACATGGGATGGCCCTTAATTGGAAATATGTGGTCTTTTCTTAGAGCATTCAAGTCCCATGATCCAGATTCTTTCATGGCCTCTTTTGTTAAAAGGTTTGGAAAAACAGGCATATACAAGGTATTAATGTTTGGAAACCCAAGTGTAATTGTGACAACACTAGAAGCATTTAAAAGAATTCTAACAGATGATGAAAATTTCATACCTGGTTGGCCACAATGTACAGTTGAACTAATTGGAGAAAAATCATTTATCAAAATGTCTTTTGAAGAACATAAACGACTTAGGCGTTTAACATCATCTTCAATCAATGGATATGAAGCACTTTCAATTTACTTGAAATTTATTGAAGAAAATGTGATTAGTTCATTGGAGAAATGGACTAATATGGGTGAAATTGAGTTCTTAACTCAAATTAGAAAACTTATTTTTAAAATTATTGTGCATATTTTTCTTGGTTCAGAAAATGATTCTGTTATGGAGGCTTTGGAAAGAGAATACACAATGCTTAATCTTGGTGTTAGAGCCATGAGAATTAATTTTCCTGGATTTGCATTCCACAAGGCACTCAAGGCTAGGAAAATTCTTGTGGCTATATTTCAATCAATTGTGGACAAGAGAAGAAATGAAAGGAAGGAAAAATTATTACCTGGCCAAAAAGCCAAAGATATGATGGATTCTTTGATAGATGTTGAAGATGAAAATGGAAGAAAATTAGGTGATGATGAAATCATTGATATCATGTTGATGTACTTAAATGCTGGTCATGAATCTTCAGGCCATATCACCATGTGGGCTACCAATTTCCTGCAAGGGCATCCAAATATTTTCAGAAAGGCAAAGGAGGAACAAGAGGAAATCCTAAGGAGAAGACCTCCAACACAAAAAGGGTTGAAGCTAGAGGAAGTTAGACAGATGGAGTATCTTTCTAAGGTGATTGATGAAACAATGAGATTGATTACAATAGCACTAATGGTCTTTAGAGAAGCAAAATCAGATGTCAATATTAATGGTTACCTCATTCCAAAAGGTTGGAAAGTTCTAGTTTGGTTCAGATCAGTTCACCTTAATCCTGAAATTTATCCTAATCCAAAGGAGTTCAATCCTGATAGATGGAATGAGGTGCACAAAGTTGGAGAATTCCTTCCATTTGGAGTAGGAACTAGATTGTGCCCCGGCAATGATCTTGCTAAGCTGGAAATCTCAGTTTTCCTTCACCATTTTCTCCTCAATTATGAGATGGAACAACTTAACCCAAAATCTCCTGTGAGATTCTTACCACATACAAGGCCAGTGGACAATTGCTTGGCAAGGATCAAGAAACGTTCAGCTGTGTGA 1470 0.3626 MGSIWIIFIAIVGALLVLRALLKNVNWLLYEAKLGVKQYSLPPGDMGWPLIGNMWSFLRAFKSHDPDSFMASFVKRFGKTGIYKVLMFGNPSVIVTTLEAFKRILTDDENFIPGWPQCTVELIGEKSFIKMSFEEHKRLRRLTSSSINGYEALSIYLKFIEENVISSLEKWTNMGEIEFLTQIRKLIFKIIVHIFLGSENDSVMEALEREYTMLNLGVRAMRINFPGFAFHKALKARKILVAIFQSIVDKRRNERKEKLLPGQKAKDMMDSLIDVEDENGRKLGDDEIIDIMLMYLNAGHESSGHITMWATNFLQGHPNIFRKAKEEQEEILRRRPPTQKGLKLEEVRQMEYLSKVIDETMRLITIALMVFREAKSDVNINGYLIPKGWKVLVWFRSVHLNPEIYPNPKEFNPDRWNEVHKVGEFLPFGVGTRLCPGNDLAKLEISVFLHHFLLNYEMEQLNPKSPVRFLPHTRPVDNCLARIKKRSAV 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01489 489 Pfam Cytochrome P450 42 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01489 489 PANTHER CYTOCHROME P450 26 38 472 - -
Trre4g01489 489 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01489 489 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01489 489 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01489 489 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01489 489 SUPERFAMILY Cytochrome P450 37 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01489 489 CDD CYP90-like 74 485 - -
Trre4g01489 489 FunFam Ent-kaurenoic acid oxidase 32 486 - -
Trre4g01489 489 Gene3D Cytochrome P450 31 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01489 489 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01489 489 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01489 489 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01489 489 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01489 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01489 Trre-Chr4 11735088 11739987 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01489 6 483 Cytochrome P450 AT1G05160 63.125 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01489 K04123 - gmx:100781238 777.319