Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01488 ATGATAGCTATGGGGTCCATATGGATTATTTTTATTGCTATTGTTGGTGCTCTTTTGGTCCTAAGAGCCCTTCTCAAGAATGTGAATTGGTTGCTCTATGAAGCAAAACTTGGTGTTAAGCAATACTCTTTGCCACCAGGTGACATGGGATGGCCCTTAATTGGAAATATGTGGTCTTTTCTTAGAGCATTCAAGTCCCATGATCCAGATTCTTTCATGGCCTCTTTTGTTAAAAGGTTTGGAAAAACAGGCATATACAAGGTATTAATGTTTGGAAACCCAAGTGTAATTGTGACAACACTAGAAGCATTTAAAAGAATTCTAACAGATGATGAAAATTTCATACCTGGTTGGCCACAATGTACAGTTGAACTAATTGGAGAAAAATCATTTATCAAAATGTCTTTTGAAGAACATAAACGACTTAGGCGTTTAACATCATCTTCAATCAATGGATATGAAGCACTTTCAATTTACTTGAAATTTATTGAAGAAAATGTGATTAGTTCATTGGAGAAATGGACTAATATGGGTGAAATTGAGTTCTTAACTCAAATTAGAAAACTTATTTTTAAAATTATTGTGCATATTTTTCTTGGTTCAGAAAATGATTCTGTTATGGAGGCTTTGGAAAGAGAATACACAATGCTTAATCTTGGTGTTAGAGCCATGAGAATTAATTTTCCTGGATTTGCATTCCACAAGGCACTCAAGGCTAGGAAAATTCTTGTGGCTATATTTCAATCAATTGTGGACAAGAGAAGAAATGAAAGGAAGGAAAAATTATTACCTGGCCAAAAAGCCAAAGATATGATGGATTCTTTGATAGATGTTGAAGATGAAAATGGAAGAAAATTAGGTGATGATGAAATCATTGATATCATGTTGATGTACTTAAATGCTGGTCATGAATCTTCAGGCCATATCACCATGTGGGCTACCAATTTCCTGCAAGGGCATCCAAATATTTTCAGAAAGGCAAAGGAGGAACAAGAGGAAATCCTAAGGAGAAGACCTCCAACACAAAAAGGGTTGAAGCTAGAGGAAGTTAGACAGATGGAGTATCTTTCTAAGGTGATTGATGAAACAATGAGATTGATTACAATAGCACTAATGGTCTTTAGAGAAGCAAAATCAGATGTCAATATTAATGGTTACCTCATTCCAAAAGGTTGGAAAGTTCTAGTTTGGTTCAGATCAGTTCACCTTAATCCTGAAATTTATCCTAATCCAAAGGAGTTCAATCCTGATAGATGGAATGAGGTGCACAAAGTTGGAGAATTCCTTCCATTTGGAGTAGGAACTAGATTGTGCCCCGGCAATGATCTTGCTAAGCTGGAAATCTCAGTTTTCCTTCACCATTTTCTCCTCAATTATGAGATGGAACAACTTAACCCAAAATCTCCTGTGAGATTCTTACCACATACAAGGCCAGTGGACAATTGCTTGGCAAGGATCAAGAAACGTTCAGCTGTGTGA 1479 0.3624 MIAMGSIWIIFIAIVGALLVLRALLKNVNWLLYEAKLGVKQYSLPPGDMGWPLIGNMWSFLRAFKSHDPDSFMASFVKRFGKTGIYKVLMFGNPSVIVTTLEAFKRILTDDENFIPGWPQCTVELIGEKSFIKMSFEEHKRLRRLTSSSINGYEALSIYLKFIEENVISSLEKWTNMGEIEFLTQIRKLIFKIIVHIFLGSENDSVMEALEREYTMLNLGVRAMRINFPGFAFHKALKARKILVAIFQSIVDKRRNERKEKLLPGQKAKDMMDSLIDVEDENGRKLGDDEIIDIMLMYLNAGHESSGHITMWATNFLQGHPNIFRKAKEEQEEILRRRPPTQKGLKLEEVRQMEYLSKVIDETMRLITIALMVFREAKSDVNINGYLIPKGWKVLVWFRSVHLNPEIYPNPKEFNPDRWNEVHKVGEFLPFGVGTRLCPGNDLAKLEISVFLHHFLLNYEMEQLNPKSPVRFLPHTRPVDNCLARIKKRSAV 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01488 492 Gene3D Cytochrome P450 34 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01488 492 FunFam Ent-kaurenoic acid oxidase 35 489 - -
Trre4g01488 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Trre4g01488 492 PANTHER CYTOCHROME P450 26 41 475 - -
Trre4g01488 492 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01488 492 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01488 492 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01488 492 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01488 492 Pfam Cytochrome P450 45 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01488 492 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01488 492 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01488 492 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01488 492 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01488 492 CDD CYP90-like 77 488 - -
Trre4g01488 492 SUPERFAMILY Cytochrome P450 40 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01488 Trre-Chr4 11735088 11739996 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01488 1 488 Cytochrome P450 AT2G32440 64.213 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01488 K04123 - gmx:100781238 777.319