Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01487 ATGATAGCTATGGGGTCCATATGGATTATTTTTATTGCTATTGTTGGTGCTCTTTTGGTCCTAAGAGCCCTTCTCAAGAATGTGAATTGGTTGCTCTATGAAGCAAAACTTGGTGTTAAGCAATACTCTTTGCCACCAGGTGACATGGGATGGCCCTTAATTGGAAATATGTGGTCTTTTCTTAGAGCATTCAAGTCCCATGATCCAGATTCTTTCATGGCCTCTTTTGTTAAAAGGTTTGGAAAAACAGGCATATACAAGGTATTAATGTTTGGAAACCCAAGTGTAATTGTGACAACACTAGAAGCATTTAAAAGAATTCTAACAGATGATGAAAATTTCATACCTGGTTGGCCACAATGTACAGTTGAACTAATTGGAGAAAAATCATTTATCAAAATGTCTTTTGAAGAACATAAACGACTTAGGCGTTTAACATCATCTTCAATCAATGGATATGAAGCACTTTCAATTTACTTGAAATTTATTGAAGAAAATGTGATTAGTTCATTGGAGAAATGGACTAATATGGAAAATGATTCTGTTATGGAGGCTTTGGAAAGAGAATACACAATGCTTAATCTTGGTGTTAGAGCCATGAGAATTAATTTTCCTGGATTTGCATTCCACAAGGCACTCAAGGCTAGGAAAATTCTTGTGGCTATATTTCAATCAATTGTGGACAAGAGAAGAAATGAAAGGAAGGAAAAATTATTACCTGGCCAAAAAGCCAAAGATATGATGGATTCTTTGATAGATGTTGAAGATGAAAATGGAAGAAAATTAGGTGATGATGAAATCATTGATATCATGTTGATGTACTTAAATGCTGGTCATGAATCTTCAGGCCATATCACCATGTGGGCTACCAATTTCCTGCAAGGGCATCCAAATATTTTCAGAAAGGCAAAGGAGGAACAAGAGGAAATCCTAAGGAGAAGACCTCCAACACAAAAAGGGTTGAAGCTAGAGGAAGTTAGACAGATGGAGTATCTTTCTAAGGTGATTGATGAAACAATGAGATTGATTACAATAGCACTAATGGTCTTTAGAGAAGCAAAATCAGATGTCAATATTAATGGTTACCTCATTCCAAAAGGTTGGAAAGTTCTAGTTTGGTTCAGATCAGTTCACCTTAATCCTGAAATTTATCCTAATCCAAAGGAGTTCAATCCTGATAGATGGAATGAGGTGCACAAAGTTGGAGAATTCCTTCCATTTGGAGTAGGAACTAGATTGTGCCCCGGCAATGATCTTGCTAAGCTGGAAATCTCAGTTTTCCTTCACCATTTTCTCCTCAATTATGAGATGGAACAACTTAACCCAAAATCTCCTGTGAGATTCTTACCACATACAAGGCCAGTGGACAATTGCTTGGCAAGGATCAAGAAACGTTCAGCTGTGTGA 1407 0.3689 MIAMGSIWIIFIAIVGALLVLRALLKNVNWLLYEAKLGVKQYSLPPGDMGWPLIGNMWSFLRAFKSHDPDSFMASFVKRFGKTGIYKVLMFGNPSVIVTTLEAFKRILTDDENFIPGWPQCTVELIGEKSFIKMSFEEHKRLRRLTSSSINGYEALSIYLKFIEENVISSLEKWTNMENDSVMEALEREYTMLNLGVRAMRINFPGFAFHKALKARKILVAIFQSIVDKRRNERKEKLLPGQKAKDMMDSLIDVEDENGRKLGDDEIIDIMLMYLNAGHESSGHITMWATNFLQGHPNIFRKAKEEQEEILRRRPPTQKGLKLEEVRQMEYLSKVIDETMRLITIALMVFREAKSDVNINGYLIPKGWKVLVWFRSVHLNPEIYPNPKEFNPDRWNEVHKVGEFLPFGVGTRLCPGNDLAKLEISVFLHHFLLNYEMEQLNPKSPVRFLPHTRPVDNCLARIKKRSAV 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01487 468 PRINTS E-class P450 group I signature 286 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01487 468 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01487 468 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01487 468 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01487 468 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01487 468 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01487 468 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01487 468 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01487 468 Pfam Cytochrome P450 45 181 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01487 468 Pfam Cytochrome P450 204 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01487 468 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Trre4g01487 468 PANTHER CYTOCHROME P450 26 42 451 - -
Trre4g01487 468 SUPERFAMILY Cytochrome P450 40 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01487 468 Gene3D Cytochrome P450 34 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01487 Trre-Chr4 11735088 11739996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01487 1 464 Cytochrome P450 AT2G32440 60.941 0.0 612