Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01431 ATGCTTCATGAAAGATCAAGTCATGTTCATGGTCTTAGTAATCTAAATATGAGGGAAGCTATGTTAGTGAATAGACCAACACGAAATTATGATGAAAAAAAGAGAATGACGTCTCAACTTGCAATTCTTGTTATGCAAGAATTGGTTAGACTTGTGATAATGTTTCTGAAGAATCTTCAAAGTATTCAGGAGTTAATAGTTGGAATTGATGGTATGAAATTGGTTGAAATGTTTCTCGACTCGGAAAAATGGACAAACCGGTTCCCAACAATTGTTACAAAAGCGGAAACTACCAAAGTGCTTGAAACCGACTTGCAAGGAAATCGAGATGGAGCTTTGTTGTTGATGAATGGAGAAATGCATATTTTATCGCCTCTAGTGCGGCCACACGAATTTAACATAATTCGATATTGCAAACAAGTTGATGTTGGTGTATGGGTGATAACCGATGTTTCATTTGATTCTTCTCAACCTAACACACCGCCTCTTTCTCGCTCTTGGAAACATCCTTCTGGATGTATGATTCGTGAAATGCCTAACAAGTCTTCTCTGGGTTCTGAAACAGTTGCATCCTTCATTTATCTTCCTCACAAACCTACCACCATCGCCGCCGTTCACCTTGCCACAGATCCACCGTCTCTCCCAACCGGACCCACTCTCCTTTCACTCCAAACTAGTCGCGATGTAGCCTCGATCTCACGGTGGTGCGATCGATCCCCTTGGCTTCGCGATGCCATCATCCCCTCACCCCTTACGGGGTTGCTTCCGAAAAATGTCGGCGGTTCAGATCCGTGTTGCTCTGGATCAAACGTCATAGACAAAAATTTTGTTGCTCGGGTCGCCAAACTTCCAAGCGGTGAATTGGTTTGTGGACGGACAACAACAATGCAAAACCAGTTCACATGTATGATTTGTTTTCAATGGAATCAATCTTTTGTTCCACACTTGGCAATAACTCTCAATCAATTTGGGTAG 975 0.4236 MLHERSSHVHGLSNLNMREAMLVNRPTRNYDEKKRMTSQLAILVMQELVRLVIMFLKNLQSIQELIVGIDGMKLVEMFLDSEKWTNRFPTIVTKAETTKVLETDLQGNRDGALLLMNGEMHILSPLVRPHEFNIIRYCKQVDVGVWVITDVSFDSSQPNTPPLSRSWKHPSGCMIREMPNKSSLGSETVASFIYLPHKPTTIAAVHLATDPPSLPTGPTLLSLQTSRDVASISRWCDRSPWLRDAIIPSPLTGLLPKNVGGSDPCCSGSNVIDKNFVARVAKLPSGELVCGRTTTMQNQFTCMICFQWNQSFVPHLAITLNQFG 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01431 324 Pfam START domain 67 183 IPR002913 GO:0008289
Trre4g01431 324 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 65 183 IPR042160 -
Trre4g01431 324 ProSiteProfiles START domain profile. 65 197 IPR002913 GO:0008289
Trre4g01431 324 SUPERFAMILY Bet v1-like 64 182 - -
Trre4g01431 324 Gene3D - 66 195 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01431 Trre-Chr4 11286434 11290240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01431 56 252 Homeobox Transcription Factor Family AT4G04890 35.533 1.58e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01431 K09338 - jre:108988074 154.066