Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01393 ATGAACTCTTCTTCTTCTTCTTCTTCTCTTCATTTCACATTGAGAGCTTTGTGCTGTGTACTGGTTGTGCTTGGAGGGTTACCCTTCTCTTTAGATGCACAACTTGATTCTTCCTTCTACAAGGACACTTGTCCCAATGTTACTTCCATTGTCCGTGAAGTTTTAACAAACGTTTCCAACACAGATCCTCGTATGCTTGCTAGTTTCATTAGGCTTCACTTTCATGATTGTTTTGTTCAAGGTTGTGATGCATCAATCTTGTTGAACGAAACTTCTACAATTGTGAGTGAGCAAGGAGCTTTGCCAAATAACAATTCAATAAGAGGTTTAGATGTTGTGAATCAAATCAAAACCGCAGTGGAAAATGCTTGTCCTAATACAGTGTCTTGTGCTGATATTCTTGCACTTGGTGCTAATATTTCCTCTGTTCTGGCTCTTGGTCCTGATTGGGAAGTTCCATTAGGAAGAAGAGATAGTTTAACAGCAAACCGAAGCCTTGCTAATCAAAACCTTCCTGGTCCCTCTTTTAATCTTACTCAACTAAAATCCTCTTTTGCTGATCAAGGTCTCGATACTACTGATCTAGTTGCACTTTCAGGTGCTCATACTATTGGTAAAGGTGTATGTCTTTTATTTGTTGATCGATTATACAATTTCAGTAATACTGGCAATCCTGATCCAACTCTTAACACAACCTACCTACAAACATTACAAGCAATATGCCCCAATGGTGGACCTGGTACCAATCTCACCGATTTGGACTTAACCACTCCTGATACATTCGACTCAAGCTACTACTCTAATCTTCAAATTCAAAAGGGCTTGTTTCAGAGTGACCAAGAATTGTTTTCCACAAGCGGTGCCGATACCATTGATATTGTCAATAGTTTTAGCAACAACCAAACTCTTTTCTTTGAAAACTTTAAGGCCTCGATGATTAAAATGGGTAATATTGGAGTGTTAACTGGATCTCAAGGTGAAATTAGAACACAATGTAACTTTGTTAATGGAAATTCTGTTGGTCTTGCTACAAAAGTCAATAGAGATTCTTCACAAGATGGTGTTATTAGCACATACTAA 1080 0.3815 MNSSSSSSSLHFTLRALCCVLVVLGGLPFSLDAQLDSSFYKDTCPNVTSIVREVLTNVSNTDPRMLASFIRLHFHDCFVQGCDASILLNETSTIVSEQGALPNNNSIRGLDVVNQIKTAVENACPNTVSCADILALGANISSVLALGPDWEVPLGRRDSLTANRSLANQNLPGPSFNLTQLKSSFADQGLDTTDLVALSGAHTIGKGVCLLFVDRLYNFSNTGNPDPTLNTTYLQTLQAICPNGGPGTNLTDLDLTTPDTFDSSYYSNLQIQKGLFQSDQELFSTSGADTIDIVNSFSNNQTLFFENFKASMIKMGNIGVLTGSQGEIRTQCNFVNGNSVGLATKVNRDSSQDGVISTY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01393 359 PANTHER PEROXIDASE 72-RELATED 32 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 Pfam Peroxidase 51 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 ProSiteProfiles Plant heme peroxidase family profile. 34 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 Gene3D - 39 336 - -
Trre4g01393 359 CDD secretory_peroxidase 34 335 IPR033905 GO:0004601|GO:0042744
Trre4g01393 359 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Trre4g01393 359 SUPERFAMILY Heme-dependent peroxidases 34 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre4g01393 359 Gene3D Peroxidase, domain 2 172 315 - -
Trre4g01393 359 FunFam Peroxidase 172 315 - -
Trre4g01393 359 FunFam Peroxidase 38 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01393 Trre-Chr4 10918535 10921412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01393 3 339 Peroxidase AT5G06730 56.380 6.10e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01393 K00430 - gmx:112997600 545.814