Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01385 ATGAACTCCATAGCAACTTCTCTATTATGTGTTGTGCTTTTAGTTCTAGGACTACCCTTATCTTCAGATGCACAACTTAGTCCAACTTTTTACAGCAAAACATGTCCTAATGTTAGTTCCATTGTCAGCAATGTCTTAACAAATGTTTCTAAGACAGATCCAAGAATGCTTGCTAGTCTTGTCAGGCTTCATTTTCATGATTGTTTTGTTCAAGGATGTGATGCATCAGTTTTGCTGAACAATACTGCTACAATTGTAAGTGAACAACAAGCTTTTCCAAATAACAACTCTTTAAGAGGTTTGGATGTTGTGAACCAAATCAAAACAGCGGTGGAAAAAGCTTGTCCTAACACAGTTTCTTGTGCCGATATTCTTACACTTGCTGCTCAAGCATCGTCTGTTCTGGCACAAGGTCCTAGTTGGACAGTTCCATTAGGAAGAAGAGATAGTTTAACCGCGAACCAATCACTTGCTAATCAAAATCTTCCCGCTCCTTTTGATGCGTTGGATAAACTTAAATCTGCATTTGCTGCACAAGGCCTCAATACTACCGATCTAGTTGCACTTTCCGGTGCGCACACGTTTGGGAGAGCTCATTGCTCATTATTTGTTAGTCGATTGTACAACTTCAGCAGTACTGGAAGTCCTGATCCAACTCTTAACACAACTTATTTACAACAATTGCGTACAATATGTCCCAATGGTGGACCTGGCACCAACCTTACCAATTTTGATCCAACAACTCCCGATAAATTTGACAAGAACTATTACTCCAATCTTCAAGTGAAAAAGGGGTTGCTTCAAAGTGATCAAGAATTGTTTTCAACATCCGGTGCAGATACTATCACCATCGTCAATAAATTCAGCTCCGATCAAAACGCTTTTTTTGAGAGCTTTAAGGCCGCAATGATTAAAATGGGTAATATTGGTGTGCTTACGGGGACCAAAGGAGAGATTAGAAAACAATGCAATTTTGTTAATTCAAAATCAGCAGAACTAGGCTTAGCCACTATGACACAAGAATCATCAGAGGATGATCTTGTTAGCTCAATATAA 1056 0.3911 MNSIATSLLCVVLLVLGLPLSSDAQLSPTFYSKTCPNVSSIVSNVLTNVSKTDPRMLASLVRLHFHDCFVQGCDASVLLNNTATIVSEQQAFPNNNSLRGLDVVNQIKTAVEKACPNTVSCADILTLAAQASSVLAQGPSWTVPLGRRDSLTANQSLANQNLPAPFDALDKLKSAFAAQGLNTTDLVALSGAHTFGRAHCSLFVSRLYNFSSTGSPDPTLNTTYLQQLRTICPNGGPGTNLTNFDPTTPDKFDKNYYSNLQVKKGLLQSDQELFSTSGADTITIVNKFSSDQNAFFESFKAAMIKMGNIGVLTGTKGEIRKQCNFVNSKSAELGLATMTQESSEDDLVSSI 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01385 351 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Trre4g01385 351 Pfam Peroxidase 44 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 SUPERFAMILY Heme-dependent peroxidases 25 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 Gene3D - 30 327 - -
Trre4g01385 351 PANTHER PEROXIDASE 72-RELATED 23 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01385 351 FunFam Peroxidase 29 174 - -
Trre4g01385 351 FunFam Peroxidase 163 306 - -
Trre4g01385 351 CDD secretory_peroxidase 25 326 IPR033905 GO:0004601|GO:0042744
Trre4g01385 351 Gene3D Peroxidase, domain 2 163 306 - -
Trre4g01385 351 ProSiteProfiles Plant heme peroxidase family profile. 25 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01385 Trre-Chr4 10869831 10872126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01385 14 351 Peroxidase AT2G38380 56.268 1.25e-135 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01385 K00430 - gmx:112997600 533.487