Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01384 ATGAACTCTCTTCGTGTTGTAGCAATAGCTTTGTGCTGTGTTGTGGTTGTGTTTGGAGTGTTACCCTTCTCCTCATATGCACAGCTTGATCCATCCTTTTACAAAAACACTTGTCCTAATGTTAGTTCCATTGTTCGTGAAGTCATAAGAAATGTTTCTAAGACAGATCCTCGTATGCTTGCTAGTCTTATTAGACTTCACTTCCATGACTGCTTTGTTCAAGGTTGTGATGCCTCAGTTTTGCTGAACACAACTGATACCATTGTGACAGAACAAGATGCTTTTCCAAATATCAACTCTTTAAGAGGTTTGGATGTTGTGAATCAAATTAAGACCGCGGTGGAAAAAGCTTGTCCTAATACAGTTTCTTGTGCCGATATTCTTGCACTTGCTGCCGAATTATCATCTACTTTGGCTGATGGTCCTGATTGGAAAGTTCCCTTAGGAAGAAGGGATAGTTTAACCGCAAACCAATCACTTGCTAATCAAAATCTTCCAGCTCCTTTCAACTCATTGGATCAACTTAAAGCTGCATTTGCCGCTCAAGGCCTCAACGCTACTGATCTAGTTGCTCTCTCGGGCGCACATACAATTGGAAGATCTCATTGTTCTTTATTTGTTAGCCGATTGTACAACTTCAGCAACACTGGAAATCCTGATCCAACTCTTAACACAACTTACTTACAACAATTGCGCAGTTTATGTCCCAATGGTGGACCTGGCACTCCCCTCGCTAATTTTGATCCAACAACTCCTGACAAATTTGACAAAAACTATTACTCCAATCTTCAACTTAAAAAGGGGTTGCTTCAAAGTGATCAAGAGTTGTTCTCAACATCGGGTGCGGATACCATTAGCATTGTCAACAAATTTAGTGCTGACCAAAAAGCTTTCTTTGAGAACTTTGCGGCTGCAATGATTAAAATGGGCAATATTGGTGTGTTAACCGGGAACAAAGGAGAGATTAGAAAACAATGCAATTTTATTAACTCAAAATCTGTTGAACTAGGTCTTGTTAATGATTCATCAGAGGAGGGTATGGTTAGCTCAATATAA 1056 0.3977 MNSLRVVAIALCCVVVVFGVLPFSSYAQLDPSFYKNTCPNVSSIVREVIRNVSKTDPRMLASLIRLHFHDCFVQGCDASVLLNTTDTIVTEQDAFPNINSLRGLDVVNQIKTAVEKACPNTVSCADILALAAELSSTLADGPDWKVPLGRRDSLTANQSLANQNLPAPFNSLDQLKAAFAAQGLNATDLVALSGAHTIGRSHCSLFVSRLYNFSNTGNPDPTLNTTYLQQLRSLCPNGGPGTPLANFDPTTPDKFDKNYYSNLQLKKGLLQSDQELFSTSGADTISIVNKFSADQKAFFENFAAAMIKMGNIGVLTGNKGEIRKQCNFINSKSVELGLVNDSSEEGMVSSI 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01384 351 FunFam Peroxidase 166 309 - -
Trre4g01384 351 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Trre4g01384 351 SUPERFAMILY Heme-dependent peroxidases 28 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 Pfam Peroxidase 45 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 PANTHER PEROXIDASE 72-RELATED 26 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 Gene3D - 33 330 - -
Trre4g01384 351 Gene3D Peroxidase, domain 2 166 309 - -
Trre4g01384 351 ProSiteProfiles Plant heme peroxidase family profile. 28 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01384 351 CDD secretory_peroxidase 28 329 IPR033905 GO:0004601|GO:0042744
Trre4g01384 351 FunFam Peroxidase 32 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01384 Trre-Chr4 10860368 10863116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01384 14 330 Peroxidase AT5G06720 56.782 3.83e-132 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01384 K00430 - gmx:112997600 536.954