Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01382 ATGAACTCCCTTAGTCTCATAACTCTTTGTTGCATAGTGGTTGTATTTGGAGGATTACCCTTCTCCTCAAATGCACAACTTAATCCAGCCTTTTACAGCAAAACTTGTCCACAATTGCAATCCATTGTTCAACAAATCTTAGGGGATGTTTCTAGGACGGATACAAGAATGCCTGCAAGTATCATCAGACTTCACTTTCATGATTGTTTTGTTCAAGGTTGTGATGCATCAGTTTTATTGAACAAGACTGCTACTATTGACAGTGAGCAAGATGCTGGTCCAAATATCAACTCCTTAAGAGGATTGGATGTTATCAATAATATTAAGACTGCAGTGGAAAAAGCTTGTCCTAATATAGTTTCTTGTGCTGATATTCTTACACTTGCGGCTGGAATATCTTCTGTTCTGACTGGAGGTCCAGGTTGGTTGGTTCCACTCGGAAGAAGAGATAGTCTAACAGCAAATAAAGATCTTGCTAATCAAAACCTTCCAGGTCCTTCTAATGACCTTACTGGACTAAAATCTGCTTTTGCTGCTCAAGGCCTCAACACAGTTGATCTAGTAGCACTCTCAGGTGCCCATACAATTGGGAGAGCACGTTGCCTTTTCATCACTGATCGATTATATAACTTCGACAGTACTGGTAAACCTGATCCAACACTTAATACAACATACTTAAAAGAATTACAAAAACAATGTCCTCAGAATGGACCCAGAACAAACCGTGTCAATTTTGACCTAACTACTCCTGATAAATTTGACAAGAACTTCTACAACAATCTTCAGGTTAAAAAGGGTTTACTTCAAAGTGACCAAGAGTTGTTCTCAACCCCTGGTGCAGATACCATTAGCATCGTCAATAATTTCGCCAACAACCAAAATGTTTTCTTTGAGAACTTTAAGAATTCAATGATTAAAATGGGTAATATTGGTGTGCTTACAGGAAAGAAAGGAGAAATTAGAAAACAATGTAACTTTGTTAACAAGAAATCTTCTGAATTGGATCTTGCCATAGAACTATTAGAAGAGGAGGATATGGTTAGTTCAATCTAA 1053 0.377 MNSLSLITLCCIVVVFGGLPFSSNAQLNPAFYSKTCPQLQSIVQQILGDVSRTDTRMPASIIRLHFHDCFVQGCDASVLLNKTATIDSEQDAGPNINSLRGLDVINNIKTAVEKACPNIVSCADILTLAAGISSVLTGGPGWLVPLGRRDSLTANKDLANQNLPGPSNDLTGLKSAFAAQGLNTVDLVALSGAHTIGRARCLFITDRLYNFDSTGKPDPTLNTTYLKELQKQCPQNGPRTNRVNFDLTTPDKFDKNFYNNLQVKKGLLQSDQELFSTPGADTISIVNNFANNQNVFFENFKNSMIKMGNIGVLTGKKGEIRKQCNFVNKKSSELDLAIELLEEEDMVSSI 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01382 350 Gene3D - 31 328 - -
Trre4g01382 350 Pfam Peroxidase 48 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 SUPERFAMILY Heme-dependent peroxidases 26 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Trre4g01382 350 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601|GO:0042744
Trre4g01382 350 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 FunFam Peroxidase 164 307 - -
Trre4g01382 350 Gene3D Peroxidase, domain 2 164 307 - -
Trre4g01382 350 FunFam Peroxidase 30 176 - -
Trre4g01382 350 PANTHER PEROXIDASE 72-RELATED 24 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01382 350 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01382 Trre-Chr4 10840475 10843535 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01382 4 328 Peroxidase AT5G06720 57.669 3.94e-132 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01382 K00430 - gmx:547499 483.026