Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01378 ATGGTTGTATTTGGAGGGTTACCCTTAACCTCAAATGCACAACTTGATCCATTGTTTTACGTTAAAACTTGTCCTCAATTGCATACTATTGTTCAAGATATCATACGGAATGTTACTAGGCAAGATCCTAGTATGCCCCCGAGTCTTATTAGACTTCACTTTCATGATTGTTTTGTTCAGGGTTGTGATGCATCAGTTTTGTTGAACAAGACTACTACTATTGAGAGCGAGCAAGATGCTCTTCCAAATCTCAACTCCTTGAGAGGATTCAATGTTGTGAATAGGATTAAACTAGCCGTGGACAATGCTTGTCCTAATCTAGTTTCTTGTGCTGATATTCTTACACTTGCTGCTGAAAAATCTTCTGTTACGACTGGTGGTCCAAGCTGGCCGGTTCCACTCGGAAGAAGGGATAGTCTAACGGCAAATAAGGCGCTTGCTAATCAAACCCTTCCAGCTCCCTTTTTGAATCTTACTGAACTAAAATCTAAATTTGCTGCTCAAGGCCTCAACACGGTTGATTTAGTAGCACTCTCAGGTGCCCATACATTTGGAAGAGCACGTTGCCTTTTATTCAAAGATCGATTATATGACTTTAACAACACTGGCCAACCTGATCCAACTCTTAATACAGTATATTTACAACAATTGCAAATACAATGTCCTCAAAATGGATCCGGTGATAATACCCGTGTTGCATTTGACCCAGTTACTCCTGGTAGATTGGACAAGCAATTCTACAACAACCTTCAAGCTAAAAAGGGTTTGCTACAAAGTGACCAAGAACTGTTATCAACACCGGGTGCAGATACCATTAGCATTGTCAATAGTTTCGCCAATAATGAATCGTTATTCTTTGAGCACTTCACAAAATCAATTATTAAAATGGGTAACATTGGTGTGCTTACCGGAACACGAGGAGAAATTAGAAAACAATGTAACTTTGTTAACAAGAAATCTTCTGAATTTGATCATGACATAGAATCTTTAGAGGAGGATGATATGGTTAGTTCAATCTAA 1020 0.3882 MVVFGGLPLTSNAQLDPLFYVKTCPQLHTIVQDIIRNVTRQDPSMPPSLIRLHFHDCFVQGCDASVLLNKTTTIESEQDALPNLNSLRGFNVVNRIKLAVDNACPNLVSCADILTLAAEKSSVTTGGPSWPVPLGRRDSLTANKALANQTLPAPFLNLTELKSKFAAQGLNTVDLVALSGAHTFGRARCLLFKDRLYDFNNTGQPDPTLNTVYLQQLQIQCPQNGSGDNTRVAFDPVTPGRLDKQFYNNLQAKKGLLQSDQELLSTPGADTISIVNSFANNESLFFEHFTKSIIKMGNIGVLTGTRGEIRKQCNFVNKKSSEFDHDIESLEEDDMVSSI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01378 339 Gene3D Peroxidase, domain 2 152 296 - -
Trre4g01378 339 ProSiteProfiles Plant heme peroxidase family profile. 14 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 Pfam Peroxidase 32 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 Gene3D - 19 317 - -
Trre4g01378 339 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 PRINTS Haem peroxidase superfamily signature 46 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 PRINTS Haem peroxidase superfamily signature 108 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 PRINTS Haem peroxidase superfamily signature 126 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 PRINTS Plant peroxidase signature 126 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 PRINTS Plant peroxidase signature 173 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 PRINTS Plant peroxidase signature 107 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 PRINTS Plant peroxidase signature 24 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 PRINTS Plant peroxidase signature 48 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 PRINTS Plant peroxidase signature 88 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 174 184 IPR019793 -
Trre4g01378 339 PANTHER PEROXIDASE 72-RELATED 13 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01378 339 FunFam Peroxidase 18 164 - -
Trre4g01378 339 CDD secretory_peroxidase 14 316 IPR033905 GO:0004601|GO:0042744
Trre4g01378 339 FunFam Peroxidase 152 296 - -
Trre4g01378 339 SUPERFAMILY Heme-dependent peroxidases 14 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01378 Trre-Chr4 10785852 10794803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01378 11 339 Peroxidase AT2G38380 56.495 1.42e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01378 K00430 - gmx:100804829 458.373