Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01371 ATGAACTCCCTTCGTTTCATAGCTCTTTGTTGTGTAGTGCTTGTGTTTGGAGGATTACCTTTCTCCTCAAATGCACAACTTGATCCAGCCTTTTACAGCAAAACTTGTCCACAATTGGACTCCATTATTAAGGAAATCATACTGAATGTTACTAGGATTGATCAACGTATGCCTGCAAGTCTCATCAGACTTCACTTTCATGATTGTTTTGTTCTAGGTTGTGATGCATCAGTTTTGTTGAACAAAACTGCTACTATTGACAGTGAACAAGATGCTGCTCCAAATAGCAACTCCTTAAGAGGATTGGATGTTATCAATAGGATTAAGGCTGCGGTGGAAATAGCTTGTCCTAATACAGTTTCTTGTGCTGATATTCTTGCACTTACTGCAGAAAAATCTTCTATTCAGACTGGAGGTCCAAGTTGGTCAGTTCCACTCGGAAGAAGAGATAGATTAAGAGCAAATAGAACTCTTGCTGATCAAAACCTTCCAGCTCCTTTTTTTCACCCTTACTCAACTAAAATCTGCATTTGCTGCTCAAGGCCTCAACACGGTGCCCATACATTTGGAAGAGCACGCTGCATTTTCATCGTTGATCGATTATATAACTTCAGCAATACTGGCCAACCCGATCCAACTCTTGATACAACATACTTACAAGTATTGCAAAAACAATGTCCTAGGGATGGATCCGGAACACATGTCTTTTTTGACCCAACTACTCCTATTAGAATGGACAACAAATTCTACAGCAATCTTCAAGTTAAAAAAGGTTTATTACAAAGTGACCAAGAATTGTTCTCAACACCGGGTGCAACTGATACCATTAGTATTGTCAATAATTTTGCCAATAACGAAACAAATTTCTTTAAGAACTTCAGGAATTCAATGATTAAAATGAGTAAGATTGGTGTGCTTACGGGAGCACAAGGAGAAATTAGAAAACATTGTAACTTTGTTAACAAGCGATCTTCTGAATTGGATCTTGGCATTGAATTATTAGAGGAGATGGTTAGTTCAATCTAA 1026 0.3801 MNSLRFIALCCVVLVFGGLPFSSNAQLDPAFYSKTCPQLDSIIKEIILNVTRIDQRMPASLIRLHFHDCFVLGCDASVLLNKTATIDSEQDAAPNSNSLRGLDVINRIKAAVEIACPNTVSCADILALTAEKSSIQTGGPSWSVPLGRRDRLRANRTLADQNLPAPFFHPYSTKICICCSRPQHGAHTFGRARCIFIVDRLYNFSNTGQPDPTLDTTYLQVLQKQCPRDGSGTHVFFDPTTPIRMDNKFYSNLQVKKGLLQSDQELFSTPGATDTISIVNNFANNETNFFKNFRNSMIKMSKIGVLTGAQGEIRKHCNFVNKRSSELDLGIELLEEMVSSI 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01371 341 FunFam Peroxidase 183 300 - -
Trre4g01371 341 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 Pfam Peroxidase 185 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 Pfam Peroxidase 49 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 Gene3D Peroxidase, domain 2 164 301 - -
Trre4g01371 341 CDD secretory_peroxidase 26 320 IPR033905 GO:0004601|GO:0042744
Trre4g01371 341 PANTHER PEROXIDASE 72-RELATED 24 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 FunFam Peroxidase 30 176 - -
Trre4g01371 341 SUPERFAMILY Heme-dependent peroxidases 26 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 Gene3D - 31 321 - -
Trre4g01371 341 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01371 341 ProSiteProfiles Plant heme peroxidase family profile. 26 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01371 Trre-Chr4 10732222 10736214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01371 23 335 Peroxidase AT4G08770 53.727 2.69e-118 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01371 K00430 - gmx:547499 425.631