Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01370 ATGAGTCCCATGCGTGTTATAGGCGTGACATTTTGGTGTGCAATTGTGATACATGTAGGGTATGGTCAGCTTAATCCTTGGTTCTACAGGGAAACATGTCCATATTTGTATACTATTGTGCTTAGAGTCATATTTGATGCTTCCCTCACTGATCCACGTATAGGTGCCAGTCTTATCAGGCTTCATTTTCATGATTGCTTTGTTCAAGGTTGCGATGGATCAGTTTTATTGAACAACACTAATAGAATAGTAAGTGAGCAAGGTGCACGTCCAAACATAAACTCAATTAGGGGTTTGGATGTTGTCAATAACATCAAGACAGCAGTGGAACATGCATGTCCCGCTACAGTCTCTTGTGCTGATATTCTTGCTATTGCGGCCGAAGTAGCTTCTGTTTTGGGAGGAGGTCCCTCATGGCCAATTCCATTGGGAAGAAGAGATAGTTTAACAGCAAACCGAAGCCTTGCAAATCAAAACCTTCCGGCACCCACCTTGAAATTGGACCAACTTAAAGCTTCATTTCGTGCTCAAGGTCTTAACACTAGAGATTTAGTTACACTCTCGGGTGCTCATACATTTGGAAGAGCTCATTGTAACAATTTCATTCAACGTCTATACAATTTCAACAATACTGGAAATCCTGATCCAACACTAAACATAAATTACTTACTAACATTGCGACAAGTATGTCCTCAAAATACAAAATTCAACAATATAAAAAATTTGGACATTACCTCACCAAATCAATTTGACAACAAATATTATTCAAATCTTAAAAACCACAATGGTTTACTTCAAACTGACCAAGAGCTATTCTCTACTCCTAATGCAGACACAATTGATATTGTCAATAGCTTTAGTAATGATCAAGATTTTTTCTTTGAGAATTTAGGGTGTCAATGA 903 0.3798 MSPMRVIGVTFWCAIVIHVGYGQLNPWFYRETCPYLYTIVLRVIFDASLTDPRIGASLIRLHFHDCFVQGCDGSVLLNNTNRIVSEQGARPNINSIRGLDVVNNIKTAVEHACPATVSCADILAIAAEVASVLGGGPSWPIPLGRRDSLTANRSLANQNLPAPTLKLDQLKASFRAQGLNTRDLVTLSGAHTFGRAHCNNFIQRLYNFNNTGNPDPTLNINYLLTLRQVCPQNTKFNNIKNLDITSPNQFDNKYYSNLKNHNGLLQTDQELFSTPNADTIDIVNSFSNDQDFFFENLGCQ 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01370 300 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Trre4g01370 300 Gene3D - 28 160 - -
Trre4g01370 300 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 FunFam Peroxidase 161 298 - -
Trre4g01370 300 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 CDD secretory_peroxidase 23 295 IPR033905 GO:0004601|GO:0042744
Trre4g01370 300 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Trre4g01370 300 SUPERFAMILY Heme-dependent peroxidases 23 295 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 Pfam Peroxidase 47 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 FunFam Peroxidase 27 179 - -
Trre4g01370 300 ProSiteProfiles Plant heme peroxidase family profile. 23 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g01370 300 Gene3D Peroxidase, domain 2 161 296 - -
Trre4g01370 300 PANTHER PEROXIDASE 72-RELATED 17 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01370 Trre-Chr4 10727026 10729642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01370 6 295 Peroxidase AT5G06720 55.172 1.08e-114 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01370 K00430 - gmx:548068 445.277