Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01361 ATGGAGCTCTACCTCCCTTTTTCTAATATAACCTTCATAGTCTCCTTTCTATTCCTCTTGTTACTACTCAAAATAGTTAAAAGATGGAGTTATAACAATTCCATGAACAACTTACTACCACCTGGACCATGGACACTGCCTCTCATAGGAAATATACATCAAGTTATTAGTAGATCATTGCCCCATCATCGCTTCAAAACTTTGGCTGATAAATATGGACCCTTAATGCACCTAAAACTAGGAGAGGTACCATACCTAATAGTTACTTCACCAACAATGGCCAAAGAGATTATGAAAACACATGACCTCAACTTTTGTGATAGGCCAAATCTTCTTTTGTCCACAATATTTACGTATAATGCTACCGATATTGTCTTCTCTACATATGGAAAACACTGGAGGCGACTACGAAAGATATGTGTTGAACAACTATTAAGTGTAAAGCGTGTCGAATCATTTAGGTCTATAAGAGAAGAAGAAGTGTTAGATCTTGTTAAATCAATATTTTTAAGTGAAGGGTCGATTGTTAATCTCACTCACAAGATTAGTTCATTGACATATGGGATAGTGGCGCGAGCAGCTTTTGGGAAAAAGTGCAAACACCAACAAGATTTCAAATCAGCAATAGAACAAGTGTTGAGTTTGTTAGGCGGAATTTGTATTTCGGATTTATATCCTTCTATTAAAATTCTTCCAAGGATGAGTAGGGCGAAGACCAAACTTGAAAAACTTCATAGAGAGCTTGATATGATATTGCAAGACATCATTGATGGTCATAAAAGCAGTCATAGTGAAGTATGCAAGGATGAAGATCTAGTTGATGCTCTTATCAAGATCCAACAAGAAAATGATTCCTCACAAAATCCCTTGACCGATGACAATATAAAATCAATTGTCCAGGACATGTTTGCTGCCGGTAGTGAAACATCGTCAACGGTTGTGTTATGGGCAATATCTGAGATGATAAAGAATCCAAAGGTGATGGAAGCAGCACAAGTTGAGGTAAGAAGAGTTTATGATAAAAAGGGGTGTGTGGATGAAACAGAATTGCACCAATTGATATACTTAAAGAATGTTATAAAAGAAACACTAAGGTTGCACCCTAGTGTACCATTGTTGGTCCCAAGAGAAAGTAGGGAAAAATGTCAAATCAATGGGTATGAGATCCCAGCTAAGACAAGGATTGCGGTCAATGTTTGGGCAATTGGAAGAGATGAAAGGTATTGGGTTGAAGCTGAGAGTTTCAAACCTGATAGATTTGTTAATAACCCAATTGATTTTAGAGGAACAAACTTTGAATACATACCATTTGGTGCTGGAAGGAGGATTTGTCCGGGCATTACATTTGGCTTACCCAACATCGAGTTGCCTCTTGCTCAGCTACTTTACCACTTTGATTGGAAACTTCCCAATGAAATGAAGAATGAAGATCTGGATATGATTGAGTCGTTTGGAATTACTCTAAGAAGAAAAAATGACCTATGTTTAATTCCTTTAATATAA 1503 0.3699 MELYLPFSNITFIVSFLFLLLLLKIVKRWSYNNSMNNLLPPGPWTLPLIGNIHQVISRSLPHHRFKTLADKYGPLMHLKLGEVPYLIVTSPTMAKEIMKTHDLNFCDRPNLLLSTIFTYNATDIVFSTYGKHWRRLRKICVEQLLSVKRVESFRSIREEEVLDLVKSIFLSEGSIVNLTHKISSLTYGIVARAAFGKKCKHQQDFKSAIEQVLSLLGGICISDLYPSIKILPRMSRAKTKLEKLHRELDMILQDIIDGHKSSHSEVCKDEDLVDALIKIQQENDSSQNPLTDDNIKSIVQDMFAAGSETSSTVVLWAISEMIKNPKVMEAAQVEVRRVYDKKGCVDETELHQLIYLKNVIKETLRLHPSVPLLVPRESREKCQINGYEIPAKTRIAVNVWAIGRDERYWVEAESFKPDRFVNNPIDFRGTNFEYIPFGAGRRICPGITFGLPNIELPLAQLLYHFDWKLPNEMKNEDLDMIESFGITLRRKNDLCLIPLI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01361 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Trre4g01361 500 Gene3D Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01361 500 CDD CYP71-like 71 494 - -
Trre4g01361 500 PANTHER OS08G0105600 PROTEIN 63 498 - -
Trre4g01361 500 Pfam Cytochrome P450 40 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01361 500 Coils Coil 234 254 - -
Trre4g01361 500 SUPERFAMILY Cytochrome P450 40 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01361 500 FunFam Cytochrome P450 71D8 32 498 - -
Trre4g01361 500 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01361 500 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01361 500 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01361 500 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01361 500 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01361 500 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01361 500 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01361 500 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01361 500 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01361 500 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01361 500 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g01361 500 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01361 Trre-Chr4 10601104 10603291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01361 40 498 Cytochrome P450 AT3G26330 42.827 5.91e-131 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01361 - K23806 mtr:11442302 770.385