Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01340 ATGTTATCTTTAAATGTTTTTCCACCAACATCATCATCGTATTCTGTCACTGTCACAAAACCAAATCACCATTTTTCCATCAATGCATCATCTCACAAACTCAAACCAAATCTTCTCAACAGGTTTCAAAGTTCAAAACTTTCTCTCAAACCCATATCTCAGATTCATCATTCACTCACAAATTCAAACTCTTTCAACAGATTCCTCTCACACCCTTTTGAATTTTCACCAAAACCCACAAACCAATTTCTCAAAGCTGTTTCTGATGAAGGAGAATTTTCACCACAAGTTAATCCTAAACCTAAAAATATCAAAAAACTTGCTTTGGTTTTTGGGTTTTGGTATTTTCAAAACATTGTTTTCAATATTTATAATAAGAAAGTTTTGAACATTTTCCCTTTTCCATGGCTTCTTGCTTCTTTTCAGCTTTTTGTTGGTTCAATTTGGATGCTTGTACTTTGGTCTTCAAAGCTTCAACCATGTCCAAAAATCTCAAAACCTTTCATTTTTGCACTTCTTGGACCTGCTTTGTTTCATACTATAGGTCACATTTCAGCTTGTGTTTCATTCTCAAAAGTTGCTGTTTCTTTCACACATGTTATTAAATCTGCAGAACCTGTTTTTTCTGTCATATTTTCTTCTGTTCTTGGTGATAGATATCCAATTCAGGTTTGGCTTTCAATTTTACCAATTGTTCTTGGTTGTTCTTTAGCTGCTGTTACTGAAGTTTCTTTCAATGTTCAAGGATTATGGTGTGCTCTTATTAGCAATTTTGGTTTTGTATTAAGAAACATTTATTCGAAAAAAAGTTTGCAAAATTTCAAAGAAGTTGATGGATTGAACTTATATGGTTGGATTACTATATTGTCATTATTGTATCTTTTTCCGGTAGCGATTTTCGTAGAAGGGTCTCAATGGATTCCGGGGTATTATAAGGCACTTGAAGCTATTGGAACGCCTTCGACTTTTTATATTTGGGTTTTGGTTTCGGGCGTGTTTTATCATCTTTATAATCAATCATCTTATCAAGCATTGGATGAAATTAGTCCGTTAACTTTCTCGGTTGGAAATACAATGAAGAGAGTGGTGGTTATCGTGTCTTCGGTTTTGGTGTTTAGGAATCCGGTTCGGCCTCTTAATGGTCTTGGTTCTGCTATTGCTATTCTTGGGACTTTTCTTTATTCACAAGCTACTGCTGCAAAGAAAGAAAAGAAAATTGAAGGTGAAAAGAGTAGTTAG 1239 0.343 MLSLNVFPPTSSSYSVTVTKPNHHFSINASSHKLKPNLLNRFQSSKLSLKPISQIHHSLTNSNSFNRFLSHPFEFSPKPTNQFLKAVSDEGEFSPQVNPKPKNIKKLALVFGFWYFQNIVFNIYNKKVLNIFPFPWLLASFQLFVGSIWMLVLWSSKLQPCPKISKPFIFALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSVLGDRYPIQVWLSILPIVLGCSLAAVTEVSFNVQGLWCALISNFGFVLRNIYSKKSLQNFKEVDGLNLYGWITILSLLYLFPVAIFVEGSQWIPGYYKALEAIGTPSTFYIWVLVSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPVRPLNGLGSAIAILGTFLYSQATAAKKEKKIEGEKSS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01340 412 Pfam Triose-phosphate Transporter family 106 395 IPR004853 -
Trre4g01340 412 SUPERFAMILY Multidrug resistance efflux transporter EmrE 285 396 - -
Trre4g01340 412 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 107 405 IPR004696 GO:0016020|GO:0022857|GO:0055085
Trre4g01340 412 PANTHER SOLUTE CARRIER FAMILY 35 106 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01340 Trre-Chr4 10340976 10342214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01340 31 410 Antiporters AT5G17630 67.470 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01340 K15283 - gmx:100101869 644.425