Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre4g01293 | ATGTTTACTCAGTCTGGTTTCAGTCTTGCACCTAAACCCTTTTTCTCAAATTTTGGTGCAATTGTGACATTTGCTATCTTTGGTACCTTTCTAGCTTCAATGGTAACAGGTGTCTTGGTTTATGTTGGTGGGTTGGTCTTCCTCATGTATAAACTACCTTTTGTTGAGTGCTTGATGTTTGGTGCTCTTATATCAGCAACCGATCCTGTTACTGTTTTGTCCATATTCCAGGAGCTGGGCACAGATGTCAATCTATATGCTTTGGTTTTCGGAGAATCTGTTCTGAATGATGCAATGGCAATTTCTCTGTACAGGACAATGTCATTGGTTAGAAATAACCCATCTGGACAAAATTTCTTCATGGTGGTTGTTAGATTTTTGGAGACTTTTGTTGGGTCTTTGTCTACAGGTGTTGGAGTTGGGTTTACATCTAACCTATTTAAGTATGCAGGCTTGGATATTGACAACCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTCTTCCCTTATTTCTCGTACATGCTGTCCGAAGGCCTTGGTTTGTCCGGTATTGTATCAATATTATTCACAGGAATTGTCATGAAGCACTATGCGTATTCAAATTTGTCACAAAGTTCTCAAAGATTTGTCTCTGCTTTTTTTGAGTTGATATCATCATTAGCAGAAACATTTATATTTATATACATGGGCTTTGACATTGCTATGGAACAACATAGCTGGTCTCATGTTGGATTTATATTCTTCTCCATTATATTCATTGTAATTGCAAGAGCCGCAAATGTCTTCTCTTGTGCTTACCTGGTCAATCTGGTCAGACCTGCTCATCGAAAGATACCTTCAAAACACCAGAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCCTTTGCCCTTGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGACAGACCATATTCACTGCAACTACAGCAATAGTTGTTTTGACGGTATTGCTGATTGGTGGTTCAACAGGTACCATGCTGGAAGCTCTAGATGTCGTAGGTGGTGACAATCACAGTGATGGCTCTTTGGCTTCAGTTGGTCCCATCACAAATTATGGGGGGAACAATGGTTATGTTGCTCCTTCATATGAGGAGGAGGAGGAAGAATCGTCATCGTCTGGGAACAAAATAAAGATGAAGCTAAAAGAATTCCACAAGAGTGCTGCATCTTTTACGGCATTAGATAGAAACTATCTCACCCCATTCTTTACAAGCCATAATGGAGATGAAGATGAAGAAGCCGAGCCTCTTACTTCTTCGAGATCTTCTTTTACTTCTTCAAGATCAGGATTTCACGGCCAGAGCCCTTATTCATCATGA | 1353 | 0.405 | MFTQSGFSLAPKPFFSNFGAIVTFAIFGTFLASMVTGVLVYVGGLVFLMYKLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVRNNPSGQNFFMVVVRFLETFVGSLSTGVGVGFTSNLFKYAGLDIDNLQNLESCLFVLFPYFSYMLSEGLGLSGIVSILFTGIVMKHYAYSNLSQSSQRFVSAFFELISSLAETFIFIYMGFDIAMEQHSWSHVGFIFFSIIFIVIARAANVFSCAYLVNLVRPAHRKIPSKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVVGGDNHSDGSLASVGPITNYGGNNGYVAPSYEEEEEESSSSGNKIKMKLKEFHKSAASFTALDRNYLTPFFTSHNGDEDEEAEPLTSSRSSFTSSRSGFHGQSPYSS | 450 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre4g01293 | 450 | Gene3D | - | 54 | 105 | - | - | |
Trre4g01293 | 450 | MobiDBLite | consensus disorder prediction | 429 | 450 | - | - | |
Trre4g01293 | 450 | MobiDBLite | consensus disorder prediction | 413 | 450 | - | - | |
Trre4g01293 | 450 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 3 | 435 | IPR018422 | GO:0006812|GO:0015385|GO:0016020|GO:1902600 | |
Trre4g01293 | 450 | NCBIfam | sodium/hydrogen exchanger 3 | 4 | 348 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085 | |
Trre4g01293 | 450 | PRINTS | Na+/H+ exchanger signature | 6 | 20 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085 | |
Trre4g01293 | 450 | PRINTS | Na+/H+ exchanger signature | 61 | 71 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085 | |
Trre4g01293 | 450 | PRINTS | Na+/H+ exchanger signature | 21 | 29 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085 | |
Trre4g01293 | 450 | Pfam | Sodium/hydrogen exchanger family | 5 | 339 | IPR006153 | GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre4g01293 | Trre-Chr4 | 9973765 | 9987485 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre4g01293 | 4 | 427 | Antiporters | AT5G55470 | 30.044 | 3.64e-38 | 143 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre4g01293 | K14724 | - | gmx:100790830 | 729.939 |