Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01291 ATGGGCACGGAGAATGAAATTTCTCCGGCCGATGCTCATCGGGCACCTCCCGGGAAAGAACAACAAGCCGCCGGCGTTGGAATCCTTCTTCAGATCATGATGTTAGTTTTATCCTTTGTTCTCGGTCATGTTCTCCGTCGCAAAAAGATTTACATCATTCCTGAAGCCAGTGCTTCTCTTCTCATAGGGTTAATTGTTGGTGTTTTAGCTAATATTTCAGATACTGAAACTAATATCAGGGCTTGGTTCAATTTTCATGAGGAGTTCTTTTTCCTGTTCCTGTTACCTCCGATCATATTTCAGTCTGGTTTCAGTCTTGCACCTAAACCCTTTTTCTCAAATTTTGGTGCAATTGTGACATTTGCTATCTTTGGTACCTTTCTAGCTTCAATGGTAACAGGTGTCTTGGTTTATGTTGGTGGGTTGGTCTTCCTCATGTATAAACTACCTTTTGTTGAGTGCTTGATGTTTGGTGCTCTTATATCAGCAACCGATCCTGTTACTGTTTTGTCCATATTCCAGGAGCTGGGCACAGATGTCAATCTATATGCTTTGGTTTTCGGAGAATCTGTTCTGAATGATGCAATGGCAATTTCTCTGTACAGGACAATGTCATTGGTTAGAAATAACCCATCTGGACAAAATTTCTTCATGGTGGTTGTTAGATTTTTGGAGACTTTTGTTGGGTCTTTGTCTACAGGTGTTGGAGTTGGGTTTACATCTGCTTTGCTATTTAAGTATGCAGGCTTGGATATTGACAACCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTCTTCCCTTATTTCTCGTACATGCTGTCCGAAGGCCTTGGTTTGTCCGGTATTGTATCAATATTATTCACAGGAATTGTCATGAAGCACTATGCGTATTCAAATTTGTCACAAAGTTCTCAAAGATTTGTCTCTGCTTTTTTTGAGTTGATATCATCATTAGCAGAAACATTTATATTTATATACATGGGCTTTGACATTGCTATGGAACAACATAGCTGGTCTCATGTTGGATTTATATTCTTCTCCATTATATTCATTGTAATTGCAAGAGCCGCAAATGTCTTCTCTTGTGCTTACCTGGTCAATCTGGTCAGACCTGCTCATCGAAAGATACCTTCAAAACACCAGAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCCTTTGCCCTTGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGACAGACCATATTCACTGCAACTACAGCAATAGTTGTTTTGACGGTATTGCTGATTGGTGGTTCAACAGGTACCATGCTGGAAGCTCTAGATGTCGTAGGTGGTGACAATCACAGTGATGGCTCTTTGGCTTCAGTTGGTCCCATCACAAATTATGGGGGGAACAATGGTTATGTTGCTCCTTCATATGAGGAGGAGGAGGAAGAATCGTCATCGTCTGGGAACAAAATAAAGATGAAGCTAAAAGAATTCCACAAGAGTGCTGCATCTTTTACGGCATTAGATAGAAACTATCTCACCCCATTCTTTACAAGCCATAATGGAGATGAAGATGAAGAAGCCGAGCCTCTTACTTCTTCGAGATCTTCTTTTACTTCTTCAAGATCAGGATTTCACGGCCAGAGCCCTTATTCATCATGA 1647 0.4111 MGTENEISPADAHRAPPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYIIPEASASLLIGLIVGVLANISDTETNIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAIFGTFLASMVTGVLVYVGGLVFLMYKLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVRNNPSGQNFFMVVVRFLETFVGSLSTGVGVGFTSALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLSEGLGLSGIVSILFTGIVMKHYAYSNLSQSSQRFVSAFFELISSLAETFIFIYMGFDIAMEQHSWSHVGFIFFSIIFIVIARAANVFSCAYLVNLVRPAHRKIPSKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVVGGDNHSDGSLASVGPITNYGGNNGYVAPSYEEEEEESSSSGNKIKMKLKEFHKSAASFTALDRNYLTPFFTSHNGDEDEEAEPLTSSRSSFTSSRSGFHGQSPYSS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01291 548 Gene3D - 151 202 - -
Trre4g01291 548 PANTHER SODIUM/HYDROGEN EXCHANGER 11 533 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Trre4g01291 548 Pfam Sodium/hydrogen exchanger family 34 437 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre4g01291 548 MobiDBLite consensus disorder prediction 527 548 - -
Trre4g01291 548 NCBIfam sodium/hydrogen exchanger 3 32 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre4g01291 548 PRINTS Na+/H+ exchanger signature 158 168 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre4g01291 548 PRINTS Na+/H+ exchanger signature 118 126 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre4g01291 548 PRINTS Na+/H+ exchanger signature 89 100 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre4g01291 548 PRINTS Na+/H+ exchanger signature 103 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre4g01291 548 MobiDBLite consensus disorder prediction 511 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01291 Trre-Chr4 9973765 9988393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01291 32 525 Antiporters AT5G55470 30.608 5.20e-51 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01291 K14724 - gmx:100790830 889.026