Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01274 ATGGGATTCGAACAACATACATTTGTTAGTAATTATAAGGTAATTTTCTCTCCAAAAAGAAAAAGCGGTAAAACAGTGGCGTTTGCGCTTCCTATTCTCCAGCGTCTTGCTGAGCATCCATTTGGTGTTTTTGCCCTGGTGCTGATGCCCACGCACGAGCTTGCATTTCAGCTAGATGAGCAGTTTCGTGCCCTTGGTTCCTCATTCCACCCCCGCACTACGGTTGAACAGGCTATAGAGTTGCTTGCCAGACCTCACATTGTTATCGCTACTCCTGGAAGGATCAAGGCTTTGCTCGAGGATAATCAAATCGCTCGTGTTTTCTTTAGCTCTAAGGTAAATGGTCATGATGAATTTGTTTCCTCTAATCACATTATTCAAATCTTTTGA 390 0.4333 MGFEQHTFVSNYKVIFSPKRKSGKTVAFALPILQRLAEHPFGVFALVLMPTHELAFQLDEQFRALGSSFHPRTTVEQAIELLARPHIVIATPGRIKALLEDNQIARVFFSSKVNGHDEFVSSNHIIQIF 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01274 129 Gene3D - 5 116 IPR027417 -
Trre4g01274 129 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 5 129 IPR014001 -
Trre4g01274 129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 104 IPR027417 -
Trre4g01274 129 PANTHER RNA HELICASE 13 103 - -
Trre4g01274 129 Pfam DEAD/DEAH box helicase 22 103 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01274 Trre-Chr4 9881452 9884665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01274 14 105 Eukaryotic Initiation Factors Gene Family AT5G11170 35.294 6.35e-10 53.5