Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01273 ATGTATCCTAGATTGATACACCCTCATGAAGGTATTGTTGTTGGACAAGATGATTTGCAAGGTGGTGTTGTTGGTGGTGGTGTCTCTAATCTTAAGGGTGACCCTTGTCTTGTTTTAACTGCTGATCCAAAACCTCGTCTTCGTTGGACTCAAGACCTTCATGAACGTTTTGTTGATGCTGTTACTCAGCTTGGAGGTCCTAGTAAAGCTACACCAAAAGCAATCATGCGGACAATGAACGTCAAGGGTTTGACTCTATTTCATTTAAAGAGTCATCTTCAGAAATACAGACTCGGGATGACAGGTTCCTATCTTTTAGAAAGCCCCGGCACTGATAACTCTTCTCCAAAGCTGCCGACTTCTGACACAAACGAGGGTTATGAAATCAAGGAGGCATTAAGAGCACAGATGGAGGTGCAAAGTAAACTACATTTGCAAGTCGAGGCAGAGAAGCACTTGCAGATTCGCCAGGATGCGGAGCGAAGATACATGGCTATGCTTGAAAGAGCGTGCAAGATGTTGGCTGATCAATTTATCGGTGCTACAGTTATAGACACAGACAGCCAAAAGTTCCAAGGAATTGAGAATAAACCACCAAGAGGTTCCTTGGTTGACCATCTTGGTTTTTACTCCTTGCCACCATCTACTGAGGTGGCCGGAGTGAATGTTCCGGAAGAAGAAATACCTCCAACTCTCCCACCTCAAAGAGCCGATTGTTCAACCGAAAGTTGTTTAACCTCACATGAGAGCTCTGGAGGATTGGCTTTAGAAGGATCTCCAAGTGCCGGAAAACGGAGAATGCTCGGCATGGACTCAATGACAGCACCTTTGATTTGGAGTGAAGCTAATATGAAAACTCAAGCCATTAATTTAGGTCAAGGTAATCATCCTCTTGGAATAACTAGGTATGGTGGCTTGTAA 921 0.4419 MYPRLIHPHEGIVVGQDDLQGGVVGGGVSNLKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGPSKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGMTGSYLLESPGTDNSSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGATVIDTDSQKFQGIENKPPRGSLVDHLGFYSLPPSTEVAGVNVPEEEIPPTLPPQRADCSTESCLTSHESSGGLALEGSPSAGKRRMLGMDSMTAPLIWSEANMKTQAINLGQGNHPLGITRYGGL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01273 306 SUPERFAMILY Homeodomain-like 44 100 IPR009057 -
Trre4g01273 306 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 26 257 IPR044848 GO:0003700
Trre4g01273 306 Pfam Myb-like DNA-binding domain 47 97 IPR001005 -
Trre4g01273 306 MobiDBLite consensus disorder prediction 228 263 - -
Trre4g01273 306 MobiDBLite consensus disorder prediction 236 254 - -
Trre4g01273 306 Pfam MYB-CC type transfactor, LHEQLE motif 128 173 IPR025756 -
Trre4g01273 306 NCBIfam myb-like DNA-binding domain, SHAQKYF class 44 98 IPR006447 GO:0003677
Trre4g01273 306 Gene3D - 43 100 - -
Trre4g01273 306 FunFam Myb family transcription factor 43 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01273 Trre-Chr4 9875178 9879172 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01273 19 247 G2-like Transcription Factor Family AT3G24120 45.560 3.97e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre4g01273 Myb_DNA-binding 3.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01273 - - gmx:100782369 507.679