Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01095 ATGCAACCAAATGAGTTTACTGAGAAATATAGTTTTATACCCAAATTCAATCCCGCCACCTATATCCCCAGCCACGACACTACTATGCCTACATCTACAATCACTACTCCCACCACAATCAACCATGCTACCATTATCCCGATCACCACTACCACCACCTTCACTAACCAAACAACCACTATCAGCACTCATACCACCACTAACACACATCTGCATCAACCAATACCCCAATCAAGAATAAAAAAAAGTAAAAATCCCGTGACATCAGTGTGCCATGTGAAGGAGGATAAACTTTTAGAAGATCAATGGCAATGGAAAAAGTATGGACGTAAATCCATTAAAGGGTCACAACATTCAAGGAGTTACTACAAATGTAGCACTTTCAAAGATTGTCCAGCTAGATTACAATTTGAAAAAAGTGAAATCGAAGAGAACACTTATGTTGTAACATATCGAGGAAACCACGATCACCCAAAACCATATTATAAACGAAAATCTAATAATGGGAACTCCCGGAACAAGTCGCCAGAGGCTAAATTACCCGTTGTCGGACAAACTGGATCATCCCAAAACTTCAAAAACTTAGGTTATCCTAATGTGGTGAAGGTGCAGCTTGATCAATCAGAGAGTAACAACGATCAAGTTATCGACAGCCATTCAACAATCACTAATCCAGAAATTAAACTTAATGAGAGTCAATCACATGTTATCCGAGAAGCTGAATCGTCCCAAAATGATCAAAAGTTGGATTCACATAACAAGATGATGTTACAACATGATGATTCGGACAGAAGAAATGCTCAGATTTTTCTTGGTGACCCTTATTCTGAAACAGATTTTATAGGGAGTTCTAATGACGATGATGACATTTTGATACCAAATATGTCAGCTATGGTGGAAGATTTCCTACTGGACATCAATCTCCTCAATGGTGGTTCTATATTACCATAG 951 0.3849 MQPNEFTEKYSFIPKFNPATYIPSHDTTMPTSTITTPTTINHATIIPITTTTTFTNQTTTISTHTTTNTHLHQPIPQSRIKKSKNPVTSVCHVKEDKLLEDQWQWKKYGRKSIKGSQHSRSYYKCSTFKDCPARLQFEKSEIEENTYVVTYRGNHDHPKPYYKRKSNNGNSRNKSPEAKLPVVGQTGSSQNFKNLGYPNVVKVQLDQSESNNDQVIDSHSTITNPEIKLNESQSHVIREAESSQNDQKLDSHNKMMLQHDDSDRRNAQIFLGDPYSETDFIGSSNDDDDILIPNMSAMVEDFLLDINLLNGGSILP 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01095 316 Gene3D WRKY domain 83 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre4g01095 316 SMART WRKY_cls 99 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre4g01095 316 MobiDBLite consensus disorder prediction 150 194 - -
Trre4g01095 316 ProSiteProfiles WRKY domain profile. 94 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre4g01095 316 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 58 289 IPR044810 GO:0003700
Trre4g01095 316 SUPERFAMILY WRKY DNA-binding domain 93 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre4g01095 316 Pfam WRKY DNA -binding domain 100 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01095 Trre-Chr4 8395300 8396552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01095 77 175 WRKY Transcription Factor Family AT5G52830 47.475 2.26e-24 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre4g01095 WRKY 2.6e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01095 - K13425 tpra:123896298 343.199