Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g01084 ATGGAAAATGATTGGGATCTATCTTCTATTGTTCGTCGCTGCAAAGTTACCACCTTTACTAATCCTTCCACCTTTTGTGAAACTCCACCTCAAAACCTAACCACCACCATCACCTCCACCACCAATAGTATTATATCCCCTATAAACACCTCACCATCTTGCTTTGAAGATTATTTTATTTTTAACCAAGAAATTAGCCCGATTGCAAATAAACACACAATGGAAAATGATTGGGATCTATCTTCTATTGTGCGTCGCTGCAAAGTTACCACCTTTACTAATCCTTCCACCTTTTGTGAAACTCCACCTCAAAAGCTAGCCACCATGGTCACCACAACAACCACAAATAGCCTTGAGGACAAACTTTCAGAAGATAAGTGGCGATGGAAAAAGTATCGACGAAAACCCATTAAAGGGTCACCACATTTAAGGAGCTACTACAAATGTAGCAGTTTCAAAGATTGTCCGGCTAGAAAACAATCTGAAAAAAGTGAAACTGAAGAGAACACTTATGTTGTAACATATCGAGGAAAGCATAATCACCCAAAACTAGAAGTTAAACAAAACTCTAATAATGGGACCGCTCGAAACAAGTCATCAGAGGCTGGATTACCCGTTGTCGGACAAGCTGGATCATCCCAAAACTCTGAAAACTTGGGTTATCCTAATGTGGTGATGGTGCAGTTTGATCAATCGGAGAGTAACAACGCTCAAGTTATCGAAGGTCATTCAAAAATTACTAATTCGGAAATCGAACTTAATGAGAGTCAATCACATGTTGTCAGCGAAGCTGGATCGTCGCAAAATGTTCAAAAATTAGATTCACATAACAAAATGATGTTACAACATGATGAGCCGGAGAGAAGAAATGCTCAGATTTTATTGAAAACTCTAATAATAATGATGACATTTTGA 915 0.3847 MENDWDLSSIVRRCKVTTFTNPSTFCETPPQNLTTTITSTTNSIISPINTSPSCFEDYFIFNQEISPIANKHTMENDWDLSSIVRRCKVTTFTNPSTFCETPPQKLATMVTTTTTNSLEDKLSEDKWRWKKYRRKPIKGSPHLRSYYKCSSFKDCPARKQSEKSETEENTYVVTYRGKHNHPKLEVKQNSNNGTARNKSSEAGLPVVGQAGSSQNSENLGYPNVVMVQFDQSESNNAQVIEGHSKITNSEIELNESQSHVVSEAGSSQNVQKLDSHNKMMLQHDEPERRNAQILLKTLIIMMTF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g01084 304 ProSiteProfiles WRKY domain profile. 118 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre4g01084 304 SMART WRKY_cls 123 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre4g01084 304 SUPERFAMILY WRKY DNA-binding domain 119 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre4g01084 304 MobiDBLite consensus disorder prediction 183 219 - -
Trre4g01084 304 Pfam WRKY DNA -binding domain 124 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre4g01084 304 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 109 263 IPR044810 GO:0003700
Trre4g01084 304 Gene3D WRKY domain 107 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g01084 Trre-Chr4 8329900 8331647 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g01084 119 199 WRKY Transcription Factor Family AT5G52830 53.086 2.91e-22 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre4g01084 WRKY 3.6e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g01084 - K13425 tpra:123896298 263.462