Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00863 ATGAATACTACTATTACTACCACTACTACTAATCTCATCAAATCCATATTATCAATAACAACAACATCTTTGTCTTTAACCCAATTAATCCCATACATAATATGCTTTATCCTTTTCCTTCTTTTCCTTGAACAGATCTCATACCTCACAAAAAAAAGTTTCATACCAGGCCCATCTTTTGTTCTTCCTTTTATAGGAAACGCAATCCCATTGGTTCGTGACCCAACAAAATTTTGGGACCTTCAATCAACCTTAGCCAAATCAACTCCTTTGGGCTTTTCAGCTAACTATATCATTGGAAACTTCATAGTTTTCGTTAGAGATACAGAACTTTCACATAAGATTTTCTCAAATGTTAAGCCCAATGCTTTTCATCTCGTGGGTCATCCATTTGGTAAGAAACTCTTTGGTGAACATAATCTTATTTACATGATGGGCCAAGAACACAAGAATCTCCGCCGTCGGATTGCGCCGAATTTTACGCCTAAAGCGCTTTCCACCTACACCTCATTGCAGCAGAGTATTATTCTCAAACATCTTAAATCATGGGTTGAGAAAGCCCAAGCCCAGGCCCGTGAGTCAATTCCAATACGTGTTTTGGCCCGTGACATGAATTTAGAAACTTCTCAGACAGTTTTTGTGGGCCCGTATTTGGGCCTAAAAGCCCGAGAGAGATTTGAGCATGATTACTTTCTATTCAACGTTGGTCTCATGAAGCTTCCGTTTGACTTTCCTGGAACAGCGTTTCGTAATGCAAGACTCGCCGTTGACCGTCTCGCCGGAACACTGGCGAATTGCACGGCGATGAGTAAGACGAAGATGGAGAAAGGTGAAGAAGAACCGTCGTGTCTCATTGATTTCTGGATGCAGGATACGATAAGAGAGATTGAAGAATCAAAGCTCAACAGAGTTACGGCGGCGCCGTTTTCCACCAACGCCGAAATCGGCGGTTATCTCTTTGATTTCCTCTTCGCAGCACAGGACGCTTCAACGTCGTCGTTGCTATGGGCGGTGGCGCTGCTTGATTCACATCCGGAGGTTCTTGCCAAAGTCAGGGAAGAAGTTGCCGGAATTTGGTCGCCGGAGTCAGACAAACTGATAACGGCTGAACAGTTAAGAGAAATGAAGTACACTCAAGCGGTGGCGCGTGAGGTTATTAGATACAGGCCTCCGGCGACTCTGGTGCCACATATTGCGGCGGAGAATTTTCCGTTAACGGAAAATTACACGATTCCGAAAGGAGCGATTGTTTTTCCGTCGGCTTTTGAGTCATCGTTTCAAGGTTTTACTGAACCGGACCGGTTCGATCCAGACCGGTTTTCAGAAGAAAGACAAGAGGATCAAATATTTAAAAGAAATTTTCTAGCTTTTGGAGCTGGGCCCCACCAATGTGTGGGCCAGAGGTATGCATTGAATCATCTTGTTCTCTTCATTGCTATGTTTACATCGTTGATTGATTTCAAGAGAGATAGAATGGACGGCTGTGATGAAATCTTTTATGTTCCTACCATTTGTCCTAAAGATGATTGTAGAGTTTTTCTGTCTAAACGTTGCACAAGGTACCCTTCCTTTCCTGGGGTTGAGGAGCTTGGTAAATGA 1599 0.4334 MNTTITTTTTNLIKSILSITTTSLSLTQLIPYIICFILFLLFLEQISYLTKKSFIPGPSFVLPFIGNAIPLVRDPTKFWDLQSTLAKSTPLGFSANYIIGNFIVFVRDTELSHKIFSNVKPNAFHLVGHPFGKKLFGEHNLIYMMGQEHKNLRRRIAPNFTPKALSTYTSLQQSIILKHLKSWVEKAQAQARESIPIRVLARDMNLETSQTVFVGPYLGLKARERFEHDYFLFNVGLMKLPFDFPGTAFRNARLAVDRLAGTLANCTAMSKTKMEKGEEEPSCLIDFWMQDTIREIEESKLNRVTAAPFSTNAEIGGYLFDFLFAAQDASTSSLLWAVALLDSHPEVLAKVREEVAGIWSPESDKLITAEQLREMKYTQAVAREVIRYRPPATLVPHIAAENFPLTENYTIPKGAIVFPSAFESSFQGFTEPDRFDPDRFSEERQEDQIFKRNFLAFGAGPHQCVGQRYALNHLVLFIAMFTSLIDFKRDRMDGCDEIFYVPTICPKDDCRVFLSKRCTRYPSFPGVEELGK 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00863 532 CDD CYP61_CYP710 92 510 - -
Trre4g00863 532 PANTHER CYTOCHROME P450 26 53 482 - -
Trre4g00863 532 SUPERFAMILY Cytochrome P450 48 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00863 532 Gene3D Cytochrome P450 47 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00863 532 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00863 532 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00863 532 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00863 532 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00863 532 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00863 532 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00863 532 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00863 532 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00863 532 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00863 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Trre4g00863 532 Pfam Cytochrome P450 56 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g00863 532 FunFam Cytochrome P450 61 45 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00863 Trre-Chr4 6513331 6514929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00863 26 524 Cytochrome P450 AT2G34500 67.936 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00863 K09832 - gmx:100808148 889.026