Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00773 ATGGCCAAGCATCATGTTGTTTTATTCTTCTTTGTATCTTTGGTTTTAGCATCAATAATTTCTTTCATGTGTGATGCGACAAAAAAAGGTGATGAAACCAGTAAACTTTACATTGTATATATGGGTTCACTTCCTAAAGAAATATCATATTCTCCAACCTCTCACCATCTTAGTATGTTGCAACAAGTTATTTATGACAGTGATATAGAAAATCATTTGGTTCAAAGTTACAAGAGGAGTTTTAATGGTTTTTCTGCCATACTCAATGATCAACAAAGGGAAAAACTTGTTGGCATGAAAGATGTTGTCTCAGTGTTTCCAAGCCAAGAGTATCACATTCAAACCACAAGATCGTGGGACTTCCTTGGTTTACCTCAATCAATCAAAAGAGGTAAAATTGTTGAGAGTGATTTGGTGATTGGAGTCTTAGACACCGGAATTTGGCCAGAATCTAGAAGTTTTAGTGATAAAGGTCTTGGTCCTATTCCAAAAAAGTGGAGGGGAGTTTGTGCAGGCGGTGGTAACTTAAGTTGCAACAATAAGATCATCGGAGCTCGATGGTACCCTGGTAGTGAGGGTGAGAGTGCAAGAGACCATCTTGGCCATGGAACACATGTCGCATCAACATTAGGCGGAAGAAGGATAAAGGGTGTGAGCTATTATGGTCTTGCAAAAGGCACCATAAGAGGTGGAGTTCCATCTTCAAGGATTGCTGTATACAAAGTTTGTAACCCAAACTGTCGTGATGATAATATTTTAGCAGCTTTTGATGATGCCATTGCTGATGGAGTTGACATCATTAACATATCTATTGGAAACAAAACTGCTGTTGATTTTCTTAAAGATACTATTGCTATTGGTTCTTTTCATGCCATGGAACAAGGAATACTCACAGTGCATGCAGCAGGCAACTATGGTCCTAACTCAAGTACTATTTCAAGTGTAGCACCTTGGTTATTTAGTGTTGCCGCAGCTACCATAGATCGTCAATTCATTGATAAACTCATTCTTGGAAATGGAAAGACTTTTATTGGGAAGTCAATTAATATTGTCCCCTCAAATGGCACAAAATTTCCAATAGTTGTGTGTAATGCTACGTCTTGCCATGGAGATTATACATCCCCTGAAAAATGTCCATGTGTAGACAAAAAACTGGTAAAGGGTAAGATTGTTTTGAGTGGAGATATAGGTGGTGGAGATATTGCTTATCCATATGGGGCAATTGGTTCAATTCTTAATTTTACATATGATGCTTCTATTATCAGTCATCGACCTTCACTTAACTTGGATTCAAAAGACTTTGATCTTGTTCAATCTTACACTTACTCCACTAAATACCCTGTAGCTGAAATATTGAAGAGTGATGTCGTCCGAGATACCACTGCTCCTAAAATTGCATCTTTCTCTTCTCGTGGTCCAAATCCTATAGTACCAGAAATTATGAAACCGGATATAAGTGCTCCTGGAATCGATATCTTGGCTGCATTTTCACCTATTGCACCAAGCATCGATGGTTATAACGTAAGTGAGAAATACAGTATACACTTTGGTACCTCTCTGGCATGTCCCCACGCTGCTGGAGTTGCCGCATATGTCAAATCATTTCATCCAGATTGGTCGCCTGCAGCTATCAAATCTGCCATCATGACCACGGCGAAAACGGTTAATGGTAATTATAATGACATGGTAGGTGAGTTCGCTTATGGATCTGGAAATGTCAATCCACAACAAGCTCTTCACCCTGGACTGATTTATGACATTACCAAGCAAGATTATATGCAAATGCTTTGTAATTTTGGTTATAATGATACCAAAGTTGAACAAATTAGTGGAGAAAAATCAAGTTGCCATGGAGCTTCAAATAGATATTTGGTGAAAGATATAAATTATCCTGCACTGGTGATTCTTGTTAAGCCTCGTAAGCGTTTTATAGCTAAGATTCATAGAACAGTGACAAACGTTGGTTCTCCTAACTCAAGCTACACGGCTACTATCATCCCAATTCCAAAAATCAAGATTGAAGTGGTGCCAAAACTTCTCTCGTTCAAATCCTTACATGAGAAACAATCCTTTGTTGTCATTGTTACCGGAAGAGCAAACTCAAATCAAACTATGTTTTCTTCATCACTTGTTTGGTCAGATGGAACCCACAATGTGAAGAGTCCAATCATTATACAAAGACTCTCTTAA 2190 0.3836 MAKHHVVLFFFVSLVLASIISFMCDATKKGDETSKLYIVYMGSLPKEISYSPTSHHLSMLQQVIYDSDIENHLVQSYKRSFNGFSAILNDQQREKLVGMKDVVSVFPSQEYHIQTTRSWDFLGLPQSIKRGKIVESDLVIGVLDTGIWPESRSFSDKGLGPIPKKWRGVCAGGGNLSCNNKIIGARWYPGSEGESARDHLGHGTHVASTLGGRRIKGVSYYGLAKGTIRGGVPSSRIAVYKVCNPNCRDDNILAAFDDAIADGVDIINISIGNKTAVDFLKDTIAIGSFHAMEQGILTVHAAGNYGPNSSTISSVAPWLFSVAAATIDRQFIDKLILGNGKTFIGKSINIVPSNGTKFPIVVCNATSCHGDYTSPEKCPCVDKKLVKGKIVLSGDIGGGDIAYPYGAIGSILNFTYDASIISHRPSLNLDSKDFDLVQSYTYSTKYPVAEILKSDVVRDTTAPKIASFSSRGPNPIVPEIMKPDISAPGIDILAAFSPIAPSIDGYNVSEKYSIHFGTSLACPHAAGVAAYVKSFHPDWSPAAIKSAIMTTAKTVNGNYNDMVGEFAYGSGNVNPQQALHPGLIYDITKQDYMQMLCNFGYNDTKVEQISGEKSSCHGASNRYLVKDINYPALVILVKPRKRFIAKIHRTVTNVGSPNSSYTATIIPIPKIKIEVVPKLLSFKSLHEKQSFVVIVTGRANSNQTMFSSSLVWSDGTHNVKSPIIIQRLS 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00773 729 ProSitePatterns Serine proteases, subtilase family, serine active site. 517 527 IPR023828 -
Trre4g00773 729 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 113 IPR037045 -
Trre4g00773 729 Gene3D - 596 728 - -
Trre4g00773 729 Gene3D - 328 458 - -
Trre4g00773 729 CDD Peptidases_S8_3 111 552 IPR034197 -
Trre4g00773 729 Pfam Fibronectin type-III domain 627 725 IPR041469 -
Trre4g00773 729 ProSitePatterns Serine proteases, subtilase family, histidine active site. 202 212 IPR022398 -
Trre4g00773 729 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 724 IPR045051 -
Trre4g00773 729 Pfam Peptidase inhibitor I9 37 113 IPR010259 -
Trre4g00773 729 Gene3D Peptidase S8/S53 domain 137 592 IPR036852 GO:0004252|GO:0006508
Trre4g00773 729 ProSiteProfiles Serine proteases, subtilase domain profile. 118 579 - -
Trre4g00773 729 CDD PA_subtilisin_like 335 451 - -
Trre4g00773 729 Pfam Subtilase family 136 570 IPR000209 GO:0006508|GO:0008236
Trre4g00773 729 SUPERFAMILY Subtilisin-like 116 579 IPR036852 GO:0004252|GO:0006508
Trre4g00773 729 PRINTS Subtilisin serine protease family (S8) signature 516 532 IPR015500 -
Trre4g00773 729 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Trre4g00773 729 PRINTS Subtilisin serine protease family (S8) signature 198 211 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00773 Trre-Chr4 5753607 5756508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00773 7 725 Subtilisin-like Serine Gene Family AT3G46850 50.000 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00773 - - psat:127076787 922.154