Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00766 ATGGAAAAGTTTAGTTCAAGTTATGGGAATGTTCTTCTTTTTGTTTTTGTTTTGTTATCAAATATTTCATTTCAACTTGCTACATGTGGCTCTATAGTAAAGTTTCTTCCTGGATTTCAAGGACCACTTCCTTTTCTGCTTGAAACTGGATATGTAGGAGTGGGTGAGAAAGATGATGTGCAAACATTTTACTATTTCATTGAATCAGACAACAATCCAAAAGATGATCCTCTTATGCTTTGGTTAACTGGTGGACCTGGTTGTTCTGCTTTGTCTGGCCTTGTCTTTGAAATTGGTCCACTTGAATTTATTAAAGAGGAGTATAATGGTAGCCTACCTAATCTGATCTTAAAACCACATTCATGGACAAAGGTGAGTAACATTATATTTGTAGATTTGCCTGTTTTCACAGGCTTCACTTATGCCACAACAGAATCTGGTTCTAAGCGAAGCGACACGATACTAGTTCACCAAGTTCATCAATTTCTCAGGAAGTGGTTGGTTGATCATCCAAAATTTCAATCGAATGAAGTTTACATTGGCGGTGATTCATACTCTGGCATTACTGTTCCGGCAATTGTTCAAGAAATTGCACAAGGAAATGAAAAAGGAGTCCAGCCATGGATAAATCTCCAGGGATACTTGTTGGGGAATGCTGTAACAACTGAAAAGGAAACAAACTATAAAATCCCCTTTGCGCATGGAATGGGACTCATATCCGATGAACTATACGAATCATTGCAAAAAAATTGTAATGGAGACTATGTGAATGTAGAGACCAGAAATGTTTTATGTTCCAGAGATATGAGTTCATTCAGTGAGGCTACATCAGGACTTAATTCAGCACATATTTTAGATCCATTATGTGAGTGGCTTGATGATACTGAAATTTCTCCAAGGAGATCTCTCATTAAGAAATATCCCTCCGAATTCCTCGCTAAAAATCTCAAATTGCCGCCCTTAAGTTGTCGAAGTTATCCATATTTCCTTTGCGGTTTTTGGGCCAACGATGATAATGTTCGCAAAGCACTGCACATACATAAGGGAAGTATCGGGAAATGGCATCGTTGTACCTATAATATACCGAATAAGGCAGATATCCATAACACCTATGATTATCACGTAAACCTCAGTAGAAAAGGGATCCGTTCGCTAATTTACAGTGGAGATCACGACATGTCGGTTCCATTCTTGTCAACACAAGCTTGGATAAGATCTTTGAATTATTCCATTGTTGATGATTGGAGACAATGGCATACAAATGACCAAGTTGCAGGATACACAAGGACATATTCTAATAAGATGACATTTGCAACTGTGAAGGGTGGAGGACACACGGCTCCGGAGTTTCGGCCTAAGGAATGTTTTGAAATGTTTAGTAGGTGGATATCTAAGAGGCCTTTGTAG 1407 0.3845 MEKFSSSYGNVLLFVFVLLSNISFQLATCGSIVKFLPGFQGPLPFLLETGYVGVGEKDDVQTFYYFIESDNNPKDDPLMLWLTGGPGCSALSGLVFEIGPLEFIKEEYNGSLPNLILKPHSWTKVSNIIFVDLPVFTGFTYATTESGSKRSDTILVHQVHQFLRKWLVDHPKFQSNEVYIGGDSYSGITVPAIVQEIAQGNEKGVQPWINLQGYLLGNAVTTEKETNYKIPFAHGMGLISDELYESLQKNCNGDYVNVETRNVLCSRDMSSFSEATSGLNSAHILDPLCEWLDDTEISPRRSLIKKYPSEFLAKNLKLPPLSCRSYPYFLCGFWANDDNVRKALHIHKGSIGKWHRCTYNIPNKADIHNTYDYHVNLSRKGIRSLIYSGDHDMSVPFLSTQAWIRSLNYSIVDDWRQWHTNDQVAGYTRTYSNKMTFATVKGGGHTAPEFRPKECFEMFSRWISKRPL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00766 468 FunFam Serine carboxypeptidase-like 11 27 468 - -
Trre4g00766 468 SUPERFAMILY alpha/beta-Hydrolases 33 467 IPR029058 -
Trre4g00766 468 Gene3D - 330 468 - -
Trre4g00766 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Trre4g00766 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Trre4g00766 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185|GO:0006508
Trre4g00766 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Trre4g00766 468 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 452 IPR001563 GO:0004185|GO:0006508
Trre4g00766 468 FunFam Carboxypeptidase 322 467 - -
Trre4g00766 468 Pfam Serine carboxypeptidase 37 464 IPR001563 GO:0004185|GO:0006508
Trre4g00766 468 Gene3D alpha/beta hydrolase 29 297 IPR029058 -
Trre4g00766 468 FunFam Carboxypeptidase 371 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00766 Trre-Chr4 5716477 5719269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00766 27 56 Calmodulin-binding Proteins AT2G22960 73.333 1.09e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00766 K16296 - gmx:100792006 779.63