Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g00735 ATGACTATCACCAATAAGGAGGGAAGATTGAGTCCTGAAGAGATGAGGAGGATGATGAGGGAAGCTGAGAGGTATAAGGTAGAGGATGAGGATCTGCGGAAGAAAGTGAAGGCAAAGAATTTGTTTGAGAATTATGTTTATGAAATGAAGGAGAAAGTGAGGAAGTTTGAGAAAGTATTGGAGGAAACTATAGAATGGTTTGATAGAAACCAATTGGCTGAAGCTGATGAGTTTGAATTCAAGAAACAGGAGTTGGAAAATAATATGCAGTATCTCTAA 279 0.3799 MTITNKEGRLSPEEMRRMMREAERYKVEDEDLRKKVKAKNLFENYVYEMKEKVRKFEKVLEETIEWFDRNQLAEADEFEFKKQELENNMQYL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g00735 92 Gene3D - 39 91 IPR029048 -
Trre4g00735 92 Pfam Hsp70 protein 2 88 IPR013126 GO:0005524|GO:0140662
Trre4g00735 92 Coils Coil 15 35 - -
Trre4g00735 92 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 38 90 IPR029048 -
Trre4g00735 92 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 38 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g00735 Trre-Chr4 5395729 5396007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g00735 1 87 Calmodulin-binding Proteins AT1G16030 49.505 2.70e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g00735 K03283 - gmx:100788531 130.954